PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016311.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Trihelix | ||||||||
Protein Properties | Length: 207aa MW: 23726.8 Da PI: 9.0723 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 73 | 5.2e-23 | 55 | 132 | 2 | 84 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 W+++e+++Li++r e+e ++ +k++k+lWe v++km+e g+ rs qCk+kw+nl +ryk +++ + ++++p+fd+ Cse_sc016311.1_g030.1 55 WSERETRDLIAIRGELEGDFVVSKRNKGLWEVVGSKMKELGYARSGDQCKCKWKNLVTRYKGKETSGDS-----TRSFPFFDE 132 *************************************************************99888776.....456899985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MFNTNTGSDM NPNNNETLAH LTQMMMMNIP PQEQQPGIIS GGVGEVEEYG RVAAWSERET 60 RDLIAIRGEL EGDFVVSKRN KGLWEVVGSK MKELGYARSG DQCKCKWKNL VTRYKGKETS 120 GDSTRSFPFF DEPHILFTRT SANTPQTPFD PEATSSRSKK RVTRTDSYQS LEEISEDEDE 180 KNITKLPMPP RKKPFREKKP FREKRIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38250.1 | 1e-26 | Trihelix family protein |