PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016124.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 379aa MW: 41613.2 Da PI: 7.4607

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016124.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.9e-32	220	275	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Cse_sc016124.1_g020.1 220 KARRCWSPELHRRFLHALQQLGGAHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 275 68****************************************************97 PP
2	Myb_DNA-binding	42.5	1.5e-13	222	273	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Cse_sc016124.1_g020.1 222 RRCWSPELHRRFLHALQQLGGAhvaTPKQIRELMKvDGLTNDEVKSHLQKYR 273 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MAFDHHISDS NEKMQRCRDY MEALETERKK IQVFERELPL CLELVTQAIE GCKQQMSGTT 60 TDYFNGQSEC SEQTSSEGPV LEEFIPLKRT SSVDEGDQEH HHQQVVNYNK PKIISSKLDI 120 KSSLSKKSDW LRSAQLSIQS PDPVEVSPKR VPVVEVKRNG SGAFHPFKKE KSADGAVAGV 180 TAVTPARDPA AAASSTAETG TRSGGCDESK SDDKGQSNRK ARRCWSPELH RRFLHALQQL 240 GGAHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PTMHNNNNSQ TPQFVVVGGI 300 WMPPPEYTNT MGTASTPTSG DTNNSKGVYA PIASHPMSIA EASMSLNKTS SNEKDGDHSH 360 ENSPSTSSST HTTTASPAF

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MAFDHHISDS NEKMQRCRDY MEALETERKK IQVFERELPL CLELVTQAIE GCKQQMSGTT  60
TDYFNGQSEC SEQTSSEGPV LEEFIPLKRT SSVDEGDQEH HHQQVVNYNK PKIISSKLDI  120
KSSLSKKSDW LRSAQLSIQS PDPVEVSPKR VPVVEVKRNG SGAFHPFKKE KSADGAVAGV  180
TAVTPARDPA AAASSTAETG TRSGGCDESK SDDKGQSNRK ARRCWSPELH RRFLHALQQL  240
GGAHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTRRPS PTMHNNNNSQ TPQFVVVGGI  300
WMPPPEYTNT MGTASTPTSG DTNNSKGVYA PIASHPMSIA EASMSLNKTS SNEKDGDHSH  360
ENSPSTSSST HTTTASPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	8e-92	G2-like family protein