PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc016122.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 178aa MW: 20387.4 Da PI: 6.0159 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.3 | 1e-30 | 115 | 173 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K+vk+s++pr+YYrC+ +gC+vkk+ver+ +d ++v++tYeg Hnh+ Cse_sc016122.1_g020.1 115 LDDGFKWRKYGKKMVKNSPNPRNYYRCSAEGCSVKKRVERDVDDARYVITTYEGVHNHQ 173 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MDAYDPMSNE SYGYRSVGSP DIDYDVPHQQ NSEFFDNFFV LDEWMHEDQA SIVPEYQDHT 60 LAYAPTVFDD GSPSMGSSSS PLQGNSNVGG TVMRQAQKAR KEKVAFRTKS QVEVLDDGFK 120 WRKYGKKMVK NSPNPRNYYR CSAEGCSVKK RVERDVDDAR YVITTYEGVH NHQRPSNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 4e-40 | WRKY family protein |