PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016027.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 312aa    MW: 36077.6 Da    PI: 8.9133
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016027.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR157.54.4e-1852147190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            ++Yn+YA+e+GF+v+ks++k++ ++g ++++ ++C++eg +++ + +      ++k+ r++ +  tgC a+  + ++  +g++++tk+
  Cse_sc016027.1_g010.1  52 EMYNKYAEEAGFEVKKSAQKNT-ETGFVKSKYLMCNREGVPKDISINtldlksSDKHVRNTRQRVTGCMARRFIILDPiSGEYKITKF 138
                            58*************9987776.9999**************999888899998899999999999******99999999********* PP

                   FAR1  82 eleHnHela 90 
                            + +HnH + 
  Cse_sc016027.1_g010.1 139 VAKHNHLMI 147
                            ******875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MLSDPFNVMT PRPTLYAHEE TLGGSVYWEP VFDHIYLPVE GEKFKTIEEC IEMYNKYAEE  60
AGFEVKKSAQ KNTETGFVKS KYLMCNREGV PKDISINTLD LKSSDKHVRN TRQRVTGCMA  120
RRFIILDPIS GEYKITKFVA KHNHLMIPKE YEHLTKKQKK MTQAEKMFVV KASNFILGAT  180
KAHNLLCNMK GGSQYVHGTS SDFKNHQRDI NVCIGESDAQ MLINKMKNRK KYVPNFTFHY  240
KVEKSELVAM FWADEVAKCN YKEFGDIVSF DATFRTNKYD MVFVPFTKID NHKKCVTLGA  300
GMLLREDEEA YT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-30FAR1 family protein