PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015881.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 123aa    MW: 14628 Da    PI: 10.1808
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015881.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.67.2e-072691090
                   FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                            GFsvr  + k+++++ge ++  f C ++g++e +  +           r++ k   ++++  +++w+vt+++ eHnH l 
  Cse_sc015881.1_g030.1  2 NGFSVRYGRFKNKNKTGEKKSVIFFCHRKGTPEAKVAH----------MRINLK---RINEIFSEEWQVTRFVAEHNHVLL 69
                           6******************************9998776..........333333...57888899*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MNGFSVRYGR FKNKNKTGEK KSVIFFCHRK GTPEAKVAHM RINLKRINEI FSEEWQVTRF  60
VAEHNHVLLS TQEVCFLPSY RCITKEDENR ILMLKEGGLS VRQIMRVMEL ERNVRHEELS  120
FLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.11e-22FAR1 family protein