PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015876.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 294aa    MW: 32667.5 Da    PI: 7.5005
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015876.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-093887154
                           CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                           r++ +  rE+ RR+++N+ f eL  ll ++     +K++Ka+i+  +++ +k+L
  Cse_sc015876.1_g020.1 38 RKVQKADREKLRREKLNDQFVELGNLLDQD----RPKNDKASIVIDTIQVLKDL 87
                           5677889**********************8....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGQRKIKLEL HQRQDLQHHQ YVQREMSEAE VKDTSDARKV QKADREKLRR EKLNDQFVEL  60
GNLLDQDRPK NDKASIVIDT IQVLKDLTTE VNRLKAECAA LYEESCELIQ EKNELREEKS  120
ALKSDIESLN AQYQQRVGVR FSTWGPTIDP SSVIVPAPCS FPVTLPVPAD PVPMHPFPFF  180
TNHKPSSPIR APALAFMPYP NQTITAYAPT SYNSSIQECV SKSSDRFRGS NDKKGDDSSN  240
VETALELKTP GSRSDQDSAA GGKKGKKAGV CSSSRYTSSQ GIHNGSSNSV VDNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.22e-64bHLH family protein