PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015869.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | TCP | ||||||||
Protein Properties | Length: 286aa MW: 32602.5 Da PI: 9.2465 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 129.3 | 3.8e-40 | 69 | 212 | 3 | 134 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssasec...eaessss 80 kkd hskihT++g+RdRRvRls+e+ ++fF Lqd LGfdk+skt++WL+ ++k i el++ s s++se+ e ++++s Cse_sc015869.1_g030.1 69 SKKDHHSKIHTAQGPRDRRVRLSIEVSRKFFFLQDLLGFDKASKTLDWLFSKSKIPIEELVKEkdqglssSISDQSEVvfpEIVEERS 156 69*************************************************************8777664333333335554444444 PP TCP 81 sasnsssg....kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134 ++ ++ + ++ ++k+ +++ + +++++sra+arararert+ekm+ k+ Cse_sc015869.1_g030.1 157 GVQDKRVKmkpgT---KSVeGKRKKITQKYNSGSPMNQSRAEARARARERTKEKMSVKK 212 4444444464332...333244444444445689999******************9984 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MFSPNHFPHL ISPTHDSPPP NSFLDYEQDD LYSKNPFVSA DGLVNGLGLD QCDEYNHDLG 60 LHIKKKKSSK KDHHSKIHTA QGPRDRRVRL SIEVSRKFFF LQDLLGFDKA SKTLDWLFSK 120 SKIPIEELVK EKDQGLSSSI SDQSEVVFPE IVEERSGVQD KRVKMKPGTK SVEGKRKKIT 180 QKYNSGSPMN QSRAEARARA RERTKEKMSV KKLNGECFSS NLALQSSFWS GIESQRDYCG 240 KMGESTMEQN FSTFYSYEHN LVESNDSRSL FKQVVAHEQQ GDRASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68800.1 | 4e-20 | TCP family protein |