PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015855.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 663aa MW: 74858.8 Da PI: 5.5655

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015855.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	26.9	9.5e-09	496	536	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 e+s ed+++++ +++k+AA eLgv+l++LKr+ ++G++ W Cse_sc015855.1_g030.1 496 ELSREDIEQHYGKTMKQAAEELGVSLSTLKRKHNKLGMPGW 536 7999*********************************9999 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MKQTAESIFG NESLMPGHGD ERLSEFLETS PTCILHKKPE TEGALWVFCS KDEGSQNNSS 60 LGVLGTRMIH DKIKSAFSKV SNGGELIVQF WAPITSGNRL VLSTSGQPFA VSDFGEALVE 120 YRGCCMGYEC NIDMNNDNNK VIKDDIEQLG DRHPMTMISG PPTNAFLNRL PEAVLDTKNH 180 REGSLMRYAS DCGLWTSYTL PIGCPSQYYS SCIGVVECSS ISSINLEIVN TMKRALEQEG 240 LNVFNVQDRI PYNTINGLTL VMDEIQVALK SVCESHKIGV AQVWISYEDE THVPFSFSSE 300 DTQTTRRLAL KLTGYNSVDE DSTASRWRFK EYYDACVMVP LKDGEELVER TLQDYQPRFC 360 ENISQLGTDT LMGWVSTDDV AFSGFTICMS SNIGDFNCAF EFIWHHNPNY VFLLEALLLT 420 LKMCLPRFNF ASGAELGDQL RVIDVDNSTK SETKYFEIFK EKRLSPIPEA MNKGKKAMVV 480 NYNARSKKKR NTTEIELSRE DIEQHYGKTM KQAAEELGVS LSTLKRKHNK LGMPGWQGPD 540 LPQRKAYNSN KNRSNESHTC IKDYGVIQYP SPTKRNENTA IKAEYAYDKI ILHLPISEAT 600 FVTVKNEIGE RIKLEDGTFK IKFLDKDGEW ILMDSDQDLS CCIQNSRNVN RSAVQLRVLL 660 HNQ

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MKQTAESIFG NESLMPGHGD ERLSEFLETS PTCILHKKPE TEGALWVFCS KDEGSQNNSS  60
LGVLGTRMIH DKIKSAFSKV SNGGELIVQF WAPITSGNRL VLSTSGQPFA VSDFGEALVE  120
YRGCCMGYEC NIDMNNDNNK VIKDDIEQLG DRHPMTMISG PPTNAFLNRL PEAVLDTKNH  180
REGSLMRYAS DCGLWTSYTL PIGCPSQYYS SCIGVVECSS ISSINLEIVN TMKRALEQEG  240
LNVFNVQDRI PYNTINGLTL VMDEIQVALK SVCESHKIGV AQVWISYEDE THVPFSFSSE  300
DTQTTRRLAL KLTGYNSVDE DSTASRWRFK EYYDACVMVP LKDGEELVER TLQDYQPRFC  360
ENISQLGTDT LMGWVSTDDV AFSGFTICMS SNIGDFNCAF EFIWHHNPNY VFLLEALLLT  420
LKMCLPRFNF ASGAELGDQL RVIDVDNSTK SETKYFEIFK EKRLSPIPEA MNKGKKAMVV  480
NYNARSKKKR NTTEIELSRE DIEQHYGKTM KQAAEELGVS LSTLKRKHNK LGMPGWQGPD  540
LPQRKAYNSN KNRSNESHTC IKDYGVIQYP SPTKRNENTA IKAEYAYDKI ILHLPISEAT  600
FVTVKNEIGE RIKLEDGTFK IKFLDKDGEW ILMDSDQDLS CCIQNSRNVN RSAVQLRVLL  660
HNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-23	Nin-like family protein