PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015675.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 453aa MW: 52245.9 Da PI: 7.5972

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015675.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.5	1.9e-17	135	230	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tgCka++++++++ +gk+++ ++ Cse_sc015675.1_g040.1 135 EMYSTYAEAGGFQIKKSGQQLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSGKYKLVQF 221 58************998888.7788999******99877777889888899999999********************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc015675.1_g040.1 222 IAKHNHVLI 230 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
LLSKSEVTKV PVWIKLHNVP LLAYSEDGLS LIATQVGKPI MLDAFTSSMC VDSWGRISFA 60 RALVELSSEA DLKHVVTMAI PKKDDSDENN LIKVPLDAIN TTSVVDDLPD LEDHLPEVED 120 TTGFVEKEIE EEAIEMYSTY AEAGGFQIKK SGQQLTKSGM VQHKYIMCNK EGIPRRINID 180 TLDPQNSDKQ KRNTTLHITG CKARIRLELD QVSGKYKLVQ FIAKHNHVLI PKEYKHFTRK 240 QRRMTQADKM FIVKAATNKI GATRVHNFLT SLKGGYEYVH GTSDDFKNHQ RDINAFIGES 300 DAEMLINKME NRKMYVPNFT FQYKEHLDFK TLDATPQCET RLKIECHAAK VYTRTIFLLV 360 QKEITEACWT CSIQNLKIQE GCEIVMVRDK NPMPYRTLNK EIEDESDTEA QTVVDYKNHD 420 IDVIPNQYIL KRWTRDIIPP DLRRKRNRYR EKT

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

LLSKSEVTKV PVWIKLHNVP LLAYSEDGLS LIATQVGKPI MLDAFTSSMC VDSWGRISFA  60
RALVELSSEA DLKHVVTMAI PKKDDSDENN LIKVPLDAIN TTSVVDDLPD LEDHLPEVED  120
TTGFVEKEIE EEAIEMYSTY AEAGGFQIKK SGQQLTKSGM VQHKYIMCNK EGIPRRINID  180
TLDPQNSDKQ KRNTTLHITG CKARIRLELD QVSGKYKLVQ FIAKHNHVLI PKEYKHFTRK  240
QRRMTQADKM FIVKAATNKI GATRVHNFLT SLKGGYEYVH GTSDDFKNHQ RDINAFIGES  300
DAEMLINKME NRKMYVPNFT FQYKEHLDFK TLDATPQCET RLKIECHAAK VYTRTIFLLV  360
QKEITEACWT CSIQNLKIQE GCEIVMVRDK NPMPYRTLNK EIEDESDTEA QTVVDYKNHD  420
IDVIPNQYIL KRWTRDIIPP DLRRKRNRYR EKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-13	FAR1 family protein