PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015525.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 678aa MW: 79314.9 Da PI: 9.4567

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015525.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.2	2e-16	1	95	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 +Y++YA+ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r+++ + tgC+a++ ++++ +gk++++k+ + Cse_sc015525.1_g040.1 1 MYSTYAEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARISLELDIvSGKYKLIKFIAK 89 6*************99888.7887999999***9998888899998999999999***********99******** PP FAR1 85 HnHela 90 HnH l Cse_sc015525.1_g040.1 90 HNHMLI 95 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MYSTYAEAGG FQIKKAGQRL TKSGIVQAKY IMCNKEGAPR HINVDTLDPK HSEKQKRNTT 60 LHVTGCQARI SLELDIVSGK YKLIKFIAKH NHMLIPKEFK HFTKKQRKMI EAEKMFVVKA 120 ATNKIGATRV HNLLTSMKGG YEYVHGTSDD FKNHQRDINM FIGESDAQML INKMENRKMY 180 VPNFTFQHKV EESELVAMFW ADEVAKCNYK EFGDIVSFDA TFRSNRYNMV FVPFTGVDNQ 240 KKCVTLGSGM LLKEDTESYT WLLKAFMTAF SKEPTMVVMD QDGAMKRAIE AVFTKSKHRL 300 CMWHIHQKIP AKICKEIYNE TDFKKRLNKI VWNMFMEPLE FEEKWDKLIE DFGLQNHKWM 360 TKMFKLQEMW IPAYFINSPL FGLMRTTSRF ESENSFFKSF TSPRATLVSF MMSYESAMER 420 QRYRQEHLDF KTLDAAPKCE TKLAIERHSA RVYTRTIFLL VQTEIKEACW TCAIQELKIE 480 EGCEIVTVRD KNLAAYRILN KEVAKELAEE GETVATEKFV DYKVPRNTED GSVVCSCRHF 540 ERFGFLCRHI FCVFKNRDIN FIPKQYILRR WTRDIIPPEL RRKRNRYGET NEEIEIFTNE 600 AMFLVDECLF RLSKDKVKMG AFVEKLKTLK KKVEDEVPNP PSRNTGDVIG EHFAIFNPEK 660 NIVNNPTKAR NKGNISEA

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MYSTYAEAGG FQIKKAGQRL TKSGIVQAKY IMCNKEGAPR HINVDTLDPK HSEKQKRNTT  60
LHVTGCQARI SLELDIVSGK YKLIKFIAKH NHMLIPKEFK HFTKKQRKMI EAEKMFVVKA  120
ATNKIGATRV HNLLTSMKGG YEYVHGTSDD FKNHQRDINM FIGESDAQML INKMENRKMY  180
VPNFTFQHKV EESELVAMFW ADEVAKCNYK EFGDIVSFDA TFRSNRYNMV FVPFTGVDNQ  240
KKCVTLGSGM LLKEDTESYT WLLKAFMTAF SKEPTMVVMD QDGAMKRAIE AVFTKSKHRL  300
CMWHIHQKIP AKICKEIYNE TDFKKRLNKI VWNMFMEPLE FEEKWDKLIE DFGLQNHKWM  360
TKMFKLQEMW IPAYFINSPL FGLMRTTSRF ESENSFFKSF TSPRATLVSF MMSYESAMER  420
QRYRQEHLDF KTLDAAPKCE TKLAIERHSA RVYTRTIFLL VQTEIKEACW TCAIQELKIE  480
EGCEIVTVRD KNLAAYRILN KEVAKELAEE GETVATEKFV DYKVPRNTED GSVVCSCRHF  540
ERFGFLCRHI FCVFKNRDIN FIPKQYILRR WTRDIIPPEL RRKRNRYGET NEEIEIFTNE  600
AMFLVDECLF RLSKDKVKMG AFVEKLKTLK KKVEDEVPNP PSRNTGDVIG EHFAIFNPEK  660
NIVNNPTKAR NKGNISEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-78	FAR1 family protein