PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015518.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 1092aa MW: 120009 Da PI: 8.234

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015518.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.3e-41	168	245	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls ak+yhrrhkvCevhska ++lv +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ Cse_sc015518.1_g040.1 168 MCQVDNCKEDLSAAKDYHRRHKVCEVHSKAGKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 245 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1092 aa Download sequence
MEEAGTQVAP SYHMYNTIGA GRFPDAHPMA KKRSLPFQGT NFLQQQQQQH QQYLQRLIPT 60 LDDSRNSWNP KSWEWDSSRL VAKPVDMMEI QKEQQQQHHH HQAATNPANS EVSKRSPVGQ 120 REEDGQLSLK LGGGLVSVEE PVTRPTKRVR SGSPGNGGGG GGGGNYPMCQ VDNCKEDLSA 180 AKDYHRRHKV CEVHSKAGKA LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR 240 RKTQPEDVAS QLLVPGNGDK NSNGDMDIVN LLTVLARAQG NAEDMTRSPP PLPNKDQLMQ 300 ILNNIKSLPL SADLASKLPA AGNMTNVSQE KPSSESQVNR ILECQKVNRI PESQKVNRIP 360 ESQKVNRVPG SSTMDLLGGL SRPESLSPNR NQVIEADKAN SGYLDQTMLH KPVTEVHSGG 420 ERSSTSFQSR GEDSDCQVLD TPVNLRLSLF SSSPEDDSPP KLASSRKYFS SDSSNPTEDP 480 SPSSSPPVVQ RLFPTKSSRE RLKPESLSTS GEITAHVKAS SGRGRGGGTT MSLELFGGPN 540 GVTDNISIQS SPYRAGYTSS SGSDQSPSSL NSDPQDRTGR ILFKLFDKDP SHLPGSLRTQ 600 VYNWLSQSPS EIEGYIRPGC VVLSIYLSMS SSSWDQLEGN FVQYINSLLQ DSGTDFWGTG 660 RFLAHTEKQI ASHMDGKVYL SKFLKAWSSP QLISISPLAI VAGKETALLL RGRNLRTPGT 720 KIYCTHADGC TLEESTELTN HESTYEEIST CSFRVSTPGA LGRCFIEIEN GLRGTSFPII 780 IADATLCQEL RLLEAEFAEV LNGQSASIKE TLHFLNELGW LFQKKQGGSS YSLSRFKFLL 840 VFSVEKDFCA LVKTLLGILL QNGPGIIEEE SSMVMLSGVN LLNRAVKRKC KNMVNMLLHY 900 SVVDTQTSSR KYIFPPNLAG PGGITPLHLA ACTSDSDDIV DALTNDPQEI GLLSWNSSLD 960 ANGLSPFQYA SMRNDNSYNM LVAQKLADRI AGQVSVRISN EIELPTINGD QQELSFRIRD 1020 RVAPKSCSRC ALVTAKHPRR MPGSQGLLHR PYIHSMLAIA AVCVCVCLFL RGAPDIGLVA 1080 PFKWENLNFG SM

Sequence ? help Back to Top

Protein Sequence Length: 1092 aa Download sequence

MEEAGTQVAP SYHMYNTIGA GRFPDAHPMA KKRSLPFQGT NFLQQQQQQH QQYLQRLIPT  60
LDDSRNSWNP KSWEWDSSRL VAKPVDMMEI QKEQQQQHHH HQAATNPANS EVSKRSPVGQ  120
REEDGQLSLK LGGGLVSVEE PVTRPTKRVR SGSPGNGGGG GGGGNYPMCQ VDNCKEDLSA  180
AKDYHRRHKV CEVHSKAGKA LVGKQMQRFC QQCSRFHPLS EFDEGKRSCR RRLAGHNRRR  240
RKTQPEDVAS QLLVPGNGDK NSNGDMDIVN LLTVLARAQG NAEDMTRSPP PLPNKDQLMQ  300
ILNNIKSLPL SADLASKLPA AGNMTNVSQE KPSSESQVNR ILECQKVNRI PESQKVNRIP  360
ESQKVNRVPG SSTMDLLGGL SRPESLSPNR NQVIEADKAN SGYLDQTMLH KPVTEVHSGG  420
ERSSTSFQSR GEDSDCQVLD TPVNLRLSLF SSSPEDDSPP KLASSRKYFS SDSSNPTEDP  480
SPSSSPPVVQ RLFPTKSSRE RLKPESLSTS GEITAHVKAS SGRGRGGGTT MSLELFGGPN  540
GVTDNISIQS SPYRAGYTSS SGSDQSPSSL NSDPQDRTGR ILFKLFDKDP SHLPGSLRTQ  600
VYNWLSQSPS EIEGYIRPGC VVLSIYLSMS SSSWDQLEGN FVQYINSLLQ DSGTDFWGTG  660
RFLAHTEKQI ASHMDGKVYL SKFLKAWSSP QLISISPLAI VAGKETALLL RGRNLRTPGT  720
KIYCTHADGC TLEESTELTN HESTYEEIST CSFRVSTPGA LGRCFIEIEN GLRGTSFPII  780
IADATLCQEL RLLEAEFAEV LNGQSASIKE TLHFLNELGW LFQKKQGGSS YSLSRFKFLL  840
VFSVEKDFCA LVKTLLGILL QNGPGIIEEE SSMVMLSGVN LLNRAVKRKC KNMVNMLLHY  900
SVVDTQTSSR KYIFPPNLAG PGGITPLHLA ACTSDSDDIV DALTNDPQEI GLLSWNSSLD  960
ANGLSPFQYA SMRNDNSYNM LVAQKLADRI AGQVSVRISN EIELPTINGD QQELSFRIRD  1020
RVAPKSCSRC ALVTAKHPRR MPGSQGLLHR PYIHSMLAIA AVCVCVCLFL RGAPDIGLVA  1080
PFKWENLNFG SM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein