PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015391.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 341aa    MW: 38665.8 Da    PI: 7.5776
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015391.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.8e-171461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +lv +++q G+g+W+++++  g+ R+ k+c++rw +yl
  Cse_sc015391.1_g010.1 14 KGPWTPEEDIILVSYIQQNGPGNWRSVPSNTGLLRCSKSCRLRWTNYL 61
                           79******************************99************97 PP
2Myb_DNA-binding50.93.6e-1667112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++T++E++ +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Cse_sc015391.1_g010.1  67 RGNFTEQEEKMIVHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                            89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ QNGPGNWRSV PSNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TEQEEKMIVH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLEKQN  120
GDSDQENDHG HHHHNHNHRH RHGSSKGCHS SSSCETMSKG QWERRLQTDI HMAKQALCDA  180
LSIDNKSINL PELPPSNQST TSSSYASSAE NIARLLPNWM NSSKKTSQTS SESVETTQTR  240
SSLINQKFPS PPSESCDNSL QFGYNNNLVQ NNHKKNYYSN CSNSDVSQSV SPETSVYQEE  300
SKPNMEEQMP PLSYLEKWLF DEAATQSDLM NMSLEGSGDF F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.14e-99MYB family protein