PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015376.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 329aa MW: 37988.2 Da PI: 8.0085 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +lv +++++G g+W+t + + g+ R++k+c++rw +yl Cse_sc015376.1_g010.1 13 KGPWTSEEDRKLVTYIEEHGHGSWRTLPLKAGLQRCGKSCRLRWTNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.7e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T +E++ + +++++lG++ W++Ia++++ +Rt++++k++w+++ Cse_sc015376.1_g010.1 66 RGKFTLQEEQTIMQLHALLGNK-WSAIASYLP-KRTDNEIKNYWNTH 110 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MGRSPSSEMG LKKGPWTSEE DRKLVTYIEE HGHGSWRTLP LKAGLQRCGK SCRLRWTNYL 60 RPDIKRGKFT LQEEQTIMQL HALLGNKWSA IASYLPKRTD NEIKNYWNTH ITKRLTKMGI 120 DPVTHKSRIR VATNLSHMTQ WENARLEAEA RLVRKSRLIS ESYQRIQDSF SPLTNESLVQ 180 HLSQPQPLCL DVLKTWQDIV LSKQSDLKGQ QTPLSTLNFF EKALSSHSNI KNGSMPILSP 240 TKNIDQPSSN IIMTTKDWEI SNEPSNVLEL TKEENVLDML EVNDILYQDL CMMEALTRPI 300 VDNIDNESHG NAFADKNDYW RQIIEELEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 1e-89 | MYB family protein |