PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015370.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 181aa MW: 21268.5 Da PI: 9.7058 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 43 | 8.4e-14 | 17 | 92 | 13 | 98 |
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +l+lpk+f ++ ++ + k+++l+ r+W v++ + k+ ++++GW++Fv +ng++e Df+vFk++g++ f ++vf+ Cse_sc015370.1_g040.1 17 KFNLSLPKSFWTNL--NEWTCKKVVLKR-VRREWPVTI--NDKG---IFSDGWRKFVMDNGVQEFDFIVFKHQGNMMF--DFMVFD 92 3459******9544..455667777665.789******..6666...79**********************9999888..677766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MVDPPNLFFK FIPPGFKFNL SLPKSFWTNL NEWTCKKVVL KRVRREWPVT INDKGIFSDG 60 WRKFVMDNGV QEFDFIVFKH QGNMMFDFMV FDQSTCERQY PNLLDEIDVE DHIHERSKKS 120 KKRKRNDNSC RKEDKSHLGG DSCFKAIMTP CNIKSSNIGE SNFILGPIKY GVYIATRKMG 180 H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31680.1 | 4e-14 | B3 family protein |