PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015316.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 153aa    MW: 17301.2 Da    PI: 5.282
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015316.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR131.75.1e-1066123258
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........tekerrtraet 58 
                             Y++YA e+GF v + ++++    g +++++f Cskeg+++ ++++          +       +++
  Cse_sc015316.1_g040.1  66 AYKDYAAEAGFIVHRGHQTND--GGIVINKEFLCSKEGTKKVKHNHgfftaedrhlQ-------KSH 123
                            6***************98877..999****************999999976554321.......222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MRQNCASNEF VEDENLSADV NVEENEEVNS PDFFISTSML IKPVVVKTLI PVEGTLFDSV  60
EEAYKAYKDY AAEAGFIVHR GHQTNDGGIV INKEFLCSKE GTKKVKHNHG FFTAEDRHLQ  120
KSHRSNTENV GATKIDFKNM SRDIYSYIGK YDA