PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015286.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 690aa MW: 80854.3 Da PI: 8.6626

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015286.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.2	6.3e-09	18	101	6	90
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek..dgkwevtkleleHnHela 90 A+++GF ++k+++k g ++ +++C ++g++++e + ++ +r++++ +t+C kl k k ++ w + l HnH+++ Cse_sc015286.1_g010.1 18 IAQSIGFLIVKARTKAD--RGYKYSIEYKCLRHGTSAREGLE-DELQRQTSTAKTNCPFKLLAKYIKgeTNGWILRVKCLRHNHDFV 101 5899*****998887..6667***********9999.888999999********999878889999999***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MYKVFLDDDV LTNWVQTIAQ SIGFLIVKAR TKADRGYKYS IEYKCLRHGT SAREGLEDEL 60 QRQTSTAKTN CPFKLLAKYI KGETNGWILR VKCLRHNHDF VDSFHGFPQA MRLKDHEFVL 120 VEQLTKHKVA PHIIPSSLKE SDLDTCLALK LYNAQNKIRG AIRGDRTPIQ VLLANLRRQG 180 YTYYPRINDR TDELEKIFFV HPTSYALWTT FPEIMRWTPH TTQLTSTNKT FSMAFSFLNC 240 EKEPNFRWVL QCVKRVIDEQ YYPWVIVTDR DLALLGACRA EFQNANKLLC RWHINQNVLK 300 NCRHIFDTEE ENASVRWSWD WMVKAPTQDM FMHYYQHLQE LLVQKHDVLR YFNNWLQHYD 360 HMFVQHYDHM FVSYITDPYR SSGQTTTCRV EGQHALLKLY LGSTQSNLDT LLSSIDKILV 420 AQETAIRDSF NTSITKKLHV CRDTLFDELR YKVSKHALQL IVVESKLDMD PFECGLQLRT 480 LSAPWPRARH THTPEEPEDD LSCQADVEKF QNVFSKASSL VKKNMLNMMR GIHAPESVST 540 REPAINESTR GRPSAKDKKS KAKKIPDLNK EPTTWHRRSY SKPIKVPDLN EEPARHSSYV 600 GEPANEGNLR HELYIVDDGS KYFMARILLL FRRYILRILN VEGDGNCGYR AIGVGLGYSE 660 DIWRNLRTLV REEVNNNQEL YREMWGTWFE

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MYKVFLDDDV LTNWVQTIAQ SIGFLIVKAR TKADRGYKYS IEYKCLRHGT SAREGLEDEL  60
QRQTSTAKTN CPFKLLAKYI KGETNGWILR VKCLRHNHDF VDSFHGFPQA MRLKDHEFVL  120
VEQLTKHKVA PHIIPSSLKE SDLDTCLALK LYNAQNKIRG AIRGDRTPIQ VLLANLRRQG  180
YTYYPRINDR TDELEKIFFV HPTSYALWTT FPEIMRWTPH TTQLTSTNKT FSMAFSFLNC  240
EKEPNFRWVL QCVKRVIDEQ YYPWVIVTDR DLALLGACRA EFQNANKLLC RWHINQNVLK  300
NCRHIFDTEE ENASVRWSWD WMVKAPTQDM FMHYYQHLQE LLVQKHDVLR YFNNWLQHYD  360
HMFVQHYDHM FVSYITDPYR SSGQTTTCRV EGQHALLKLY LGSTQSNLDT LLSSIDKILV  420
AQETAIRDSF NTSITKKLHV CRDTLFDELR YKVSKHALQL IVVESKLDMD PFECGLQLRT  480
LSAPWPRARH THTPEEPEDD LSCQADVEKF QNVFSKASSL VKKNMLNMMR GIHAPESVST  540
REPAINESTR GRPSAKDKKS KAKKIPDLNK EPTTWHRRSY SKPIKVPDLN EEPARHSSYV  600
GEPANEGNLR HELYIVDDGS KYFMARILLL FRRYILRILN VEGDGNCGYR AIGVGLGYSE  660
DIWRNLRTLV REEVNNNQEL YREMWGTWFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-06	FAR1 family protein