PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015049.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 227aa MW: 26141.7 Da PI: 8.5635 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.7 | 2.6e-24 | 17 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 +p G+rF Ptdee++v+yL++kv + +l++ ++i+ ++++ +P+ Lp +++ y+F+k++ ++ + sgyW Cse_sc015049.1_g010.1 17 MPIGYRFCPTDEEIIVHYLRPKVFSFPLPA-TAIHLYnNLFNQHPSCLPGD---PKEKRYYFCKTSDINH------ATNVSGYWMPNI 94 699**************************9.67888779**********33...45678****9877532......23349***9887 PP NAM 88 kdkevlsk......kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 k++ ++ ++ +g kk++vfy k ++++g+kt+W++h+yr+ Cse_sc015049.1_g010.1 95 KNNVNAHElilatgCNHPIGFKKSFVFYelKDQRRSGSKTSWILHQYRV 143 755444446776777788**********76678999***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDTPTVATPT TTVTVQMPIG YRFCPTDEEI IVHYLRPKVF SFPLPATAIH LYNNLFNQHP 60 SCLPGDPKEK RYYFCKTSDI NHATNVSGYW MPNIKNNVNA HELILATGCN HPIGFKKSFV 120 FYELKDQRRS GSKTSWILHQ YRVLYPLPIK MEEWVVCSIH MKSKKVKKNK KQEGSSKRVK 180 RCHKKNDISH VVTDDDSTSS ASSGITFNNL DDRKDEDEED EEESKVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14000.1 | 1e-25 | NAC family protein |