PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015005.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 447aa MW: 50707.9 Da PI: 5.6978

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015005.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29	2.6e-09	7	47	7	48
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +Ed +l + + +G+++W+ +a+++ +t qc+ rw++yl Cse_sc015005.1_g030.1 7 QEDAILREQIGTHGTDNWAIVASKFK-DKTTRQCRRRWFTYL 47 79*********************9.***********97 PP
2	Myb_DNA-binding	43.3	8.4e-14	53	96	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + Cse_sc015005.1_g030.1 53 KGGWSQEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 96 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MGCFVYQEDA ILREQIGTHG TDNWAIVASK FKDKTTRQCR RRWFTYLNSD FKKGGWSQEE 60 DMLLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFSTLCKK RAKSEALAKE NNTSYITANN 120 KRTRFQTGQD ADRFLETVMP PSKMRRKHIP DTIEDCNVEE EVTGTFRTID QQLRPPFAVL 180 MHNCHNTNNL TTHLHPKSED VSKDGTFLKK DDPKIIALLQ QAELLSSLAL KVNTEKTTES 240 YENACKVKRF FAIQDFLNQT KKNDVLGFNV SDMDFQFENI KDLVEDVRSC NEGSQQSWRQ 300 PDLYQGSPDS SDYSTGSTVL PQVLENMEPL QDGFCEVEHQ TNQVMQPNSN VDGKNIPIPD 360 STTNQDILAS CDDFDNDVEA LCPLPNSEFN SPLQVTPLFR SLGAGIPSPQ FSESERNFLL 420 KTLGMESTPH KPGTQPPPCK RALLHCL

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MGCFVYQEDA ILREQIGTHG TDNWAIVASK FKDKTTRQCR RRWFTYLNSD FKKGGWSQEE  60
DMLLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFSTLCKK RAKSEALAKE NNTSYITANN  120
KRTRFQTGQD ADRFLETVMP PSKMRRKHIP DTIEDCNVEE EVTGTFRTID QQLRPPFAVL  180
MHNCHNTNNL TTHLHPKSED VSKDGTFLKK DDPKIIALLQ QAELLSSLAL KVNTEKTTES  240
YENACKVKRF FAIQDFLNQT KKNDVLGFNV SDMDFQFENI KDLVEDVRSC NEGSQQSWRQ  300
PDLYQGSPDS SDYSTGSTVL PQVLENMEPL QDGFCEVEHQ TNQVMQPNSN VDGKNIPIPD  360
STTNQDILAS CDDFDNDVEA LCPLPNSEFN SPLQVTPLFR SLGAGIPSPQ FSESERNFLL  420
KTLGMESTPH KPGTQPPPCK RALLHCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	1e-132	MYB family protein