PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014753.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 279aa    MW: 31418.3 Da    PI: 6.3728
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014753.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.41.5e-35101012102
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+y++++d+ +++++sw+e+gn fvv+++ +fa+++Lp+ Fkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+g
  Cse_sc014753.1_g040.1  10 FLMKTYQMVDDPMTNDMVSWNESGNGFVVWKTADFARDLLPNSFKHNNFSSFVRQLNTYGFHKTLPDK---------WEFANEYFKRG 88 
                            9***************************************************************9999.........*********** PP

                            XXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkks 102
                            +kell +i+r+k+
  Cse_sc014753.1_g040.1  89 RKELLIEINRRKT 101
                            **********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVHRSSPAPF LMKTYQMVDD PMTNDMVSWN ESGNGFVVWK TADFARDLLP NSFKHNNFSS  60
FVRQLNTYGF HKTLPDKWEF ANEYFKRGRK ELLIEINRRK TVTPPKGKSD GGEGGSSSGD  120
DLGSSSASSQ DSKNPGSVIL PMVEKIENLS DENMKLKEEK QVLTSELAHA KKQCDDLVAF  180
LTQCVKVEPN QISRIMNGDI TLGDKGVSGH ETDGDEDADN DEECFRLFGV LLKNGKKKRC  240
QNDKNETPGA EMKRMKLQGD IPWMNKLYSV TEQYNKACN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-69HSF family protein