PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014728.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 614aa MW: 70917.1 Da PI: 9.0566

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014728.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.8	3.1e-17	74	178	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++Y ke GF+vrk +k+ ++++ + f+C ++g++ k + ++ +rr+ra+ ++gC+a+l++kk+ d Cse_sc014728.1_g040.1 74 AYQDYTKEGGFEVRKGGQKNYNKKEDPSLKYFYCVRQGFKPVPKPEnsivdksqttnplgvnKVIKRRKRASCHCGCTAQLRLKKRPD 161 59************99999899999********987777779********999999****************** PP FAR1 74 gkwevtkleleHnHela 90 gk+ vtk+ ++HnH+l+ Cse_sc014728.1_g040.1 162 GKFFVTKFFEKHNHSLV 178 ************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MAEHQHHHVE GEPVTPRAVH NEQSTSGEGY FTPPEHKDGS FQPTPNGTRF WVPKVNTKPK 60 EGMVFDTLDI AFKAYQDYTK EGGFEVRKGG QKNYNKKEDP SLKYFYCVRQ GFKPVPKPEN 120 SIVDKSQTTN PLGVNKVIKR RKRASCHCGC TAQLRLKKRP DGKFFVTKFF EKHNHSLVYP 180 DDIKYLRTNR RLTFTKQQIL NQLSNANIGP VRSWKVLKEM YDSQITGNAS VVYVNRYNMV 240 LLPFTGIDNH NRCVIFAAAF NTDFKRRLCD IVWTDKIEAD VFDEQWAAIM DDFELGEHKW 300 LHDMFEIRSK WIPAYFRHEP MSGLMRTTSR SESENHFLGQ VTNPHLSLIE FLSHFDTAMD 360 SQRFKYGKNT HDSNYKTPVL KTHLQVEKEA AELYTHTLMR FGRLCIIVRQ NDTSSTYVIR 420 DTEADYKIQG VPVEVTYEVT FTDFISLSSQ FRAYSLYKSP QFRYMHTFSG FKQFHMFSFN 480 IGHRRWSKHA LPIKTVGRST DVASPSNPVE CVNVVLRXLD IPSAPEMNKK ELYAAALGVT 540 EPPEVNIVAP ECRNKGSVSL KRHQTQAEIA IIQTNKTPRH CSYCDTYGYH DSRNCPKKKQ 600 DLEEAMDDSN SVAE

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MAEHQHHHVE GEPVTPRAVH NEQSTSGEGY FTPPEHKDGS FQPTPNGTRF WVPKVNTKPK  60
EGMVFDTLDI AFKAYQDYTK EGGFEVRKGG QKNYNKKEDP SLKYFYCVRQ GFKPVPKPEN  120
SIVDKSQTTN PLGVNKVIKR RKRASCHCGC TAQLRLKKRP DGKFFVTKFF EKHNHSLVYP  180
DDIKYLRTNR RLTFTKQQIL NQLSNANIGP VRSWKVLKEM YDSQITGNAS VVYVNRYNMV  240
LLPFTGIDNH NRCVIFAAAF NTDFKRRLCD IVWTDKIEAD VFDEQWAAIM DDFELGEHKW  300
LHDMFEIRSK WIPAYFRHEP MSGLMRTTSR SESENHFLGQ VTNPHLSLIE FLSHFDTAMD  360
SQRFKYGKNT HDSNYKTPVL KTHLQVEKEA AELYTHTLMR FGRLCIIVRQ NDTSSTYVIR  420
DTEADYKIQG VPVEVTYEVT FTDFISLSSQ FRAYSLYKSP QFRYMHTFSG FKQFHMFSFN  480
IGHRRWSKHA LPIKTVGRST DVASPSNPVE CVNVVLRXLD IPSAPEMNKK ELYAAALGVT  540
EPPEVNIVAP ECRNKGSVSL KRHQTQAEIA IIQTNKTPRH CSYCDTYGYH DSRNCPKKKQ  600
DLEEAMDDSN SVAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-17	FAR1 family protein