PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014692.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 290aa    MW: 33065.5 Da    PI: 6.894
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014692.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.52.3e-1697143148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            +g+WT+eEd+ + ++v+  G   W++Ia+ ++ gR +kqc++rw+++l
  Cse_sc014692.1_g030.1  97 KGPWTKEEDDHIMKLVEANGCMKWSLIAKDLP-GRIGKQCRERWHNHL 143
                            79******************99**********.*************97 PP
2Myb_DNA-binding32.71.7e-10149181135
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgR 35 
                            r +W++eE+  l  +++ +G++ W+ Ia++++ gR
  Cse_sc014692.1_g030.1 149 REAWSKEEESTLTYYHRIHGNK-WAEIAKHLP-GR 181
                            789*******************.*********.99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MIFVINTPRL SFLPKQHHNI TSSLITTTAP RPPPQPRRCS PPRPPSPTTT TAPPLICNLR  60
HGIVYQGYTV CTERIPGRTD VQCLHRWQKV LNPQIIKGPW TKEEDDHIMK LVEANGCMKW  120
SLIAKDLPGR IGKQCRERWH NHLDPAIKRE AWSKEEESTL TYYHRIHGNK WAEIAKHLPG  180
RVTESSVGYK DCLLADDDEP LYEGSKQSKY QAALAFYNWK IKCNVKDAGF EQLLRFVKSA  240
LPGGEKLAGS IDEMKKVLEK LGIAYEEVSD KQEEVDDESD DSNEDGDDHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02320.21e-52MYB family protein