PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014583.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 526aa    MW: 59268.3 Da    PI: 6.6763
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014583.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.91.6e-1301565251373
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            l+elL++cA a++ ++l + + l+++ + l+s +gdp+qRl ay++e+L ar   s++++y+al+++e +    ++ l++++++++++
  Cse_sc014583.1_g030.1 156 LKELLTACASALAGNKLDEFKVLVEHARALVSISGDPIQRLGAYMVEGLVARRELSGTHIYRALRCREPE---GKDLLSYMQILYDIC 240
                            5799*************************************************99**************9...9************** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgv 174
                            P+lkf++++aN aI ea  +e+r+HiiDf+i qG+QW++LlqaLa+Rp+gpp++RiTg+++p s+  + ++le +g+rL+ + +++++
  Cse_sc014583.1_g030.1 241 PYLKFGYMAANGAIAEACRNEDRIHIIDFQIAQGTQWMTLLQALAARPGGPPHVRITGIDDPVSKyaRGDSLELVGKRLEMVSKKFNI 328
                            **************************************************************999999******************** PP

                   GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                            p+ef++l       ++ ++L+v+pgEalaVn+ lqlh+++desv+++++rde L++vkslsPkvv+++eqe+++n++ F+ rfleal+
  Cse_sc014583.1_g030.1 329 PIEFHPL-PVYAPHVTKSMLDVRPGEALAVNFPLQLHHMPDESVDVNNPRDERLRMVKSLSPKVVTLIEQESNTNTAAFFPRFLEALD 415
                            ******6.77788999************************************************************************ PP

                   GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                            yysa+f+s++a+  r+++eri+vE+++l+r+ivn++aceg+er+erhe ++kWr+rl++aGFk++pls ++++ ++ ll+ ++ + y+
  Cse_sc014583.1_g030.1 416 YYSAMFESMDATSTRDKKERINVEQHCLARDIVNIIACEGKERVERHELFKKWRSRLTMAGFKQYPLSGYVNSVIRDLLKCYS-KHYT 502
                            ************9******************************************************************9999.55** PP

                   GRAS 351 veeesgslvlgWkdrpLvsvSaW 373
                            + ee+g+++lgWk+r+L+s+SaW
  Cse_sc014583.1_g030.1 503 LVEEDGAMLLGWKERNLISASAW 525
                            *********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 526 aa     Download sequence    
MGSEQYSGYR VTGQPSSYSS PKPQIPLFPT RRIESLKFES RDSPNSPFVN PFDSEVFTTN  60
SDSREKYSST SGASPSSLED CSSVNPSSSV HYMINALQDI ETTLMAPDDD ISMPINPSYG  120
QNQWPQPSNQ RPAQWTHEPT SSNMVQPQVL HTTSNLKELL TACASALAGN KLDEFKVLVE  180
HARALVSISG DPIQRLGAYM VEGLVARREL SGTHIYRALR CREPEGKDLL SYMQILYDIC  240
PYLKFGYMAA NGAIAEACRN EDRIHIIDFQ IAQGTQWMTL LQALAARPGG PPHVRITGID  300
DPVSKYARGD SLELVGKRLE MVSKKFNIPI EFHPLPVYAP HVTKSMLDVR PGEALAVNFP  360
LQLHHMPDES VDVNNPRDER LRMVKSLSPK VVTLIEQESN TNTAAFFPRF LEALDYYSAM  420
FESMDATSTR DKKERINVEQ HCLARDIVNI IACEGKERVE RHELFKKWRS RLTMAGFKQY  480
PLSGYVNSVI RDLLKCYSKH YTLVEEDGAM LLGWKERNLI SASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-175GRAS family protein