PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014029.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 320aa MW: 36427.9 Da PI: 7.207

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014029.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl Cse_sc014029.1_g060.1 14 RGPWSPEEDAKLKSYIEEHGTGgNWIALPHKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	37.7	4.7e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Cse_sc014029.1_g060.1 69 GSFSEEEDHIICTLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE EHGTGGNWIA LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGS FSEEEDHIIC TLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLMGK 120 QRKDQQSLKR GGQMKQQMKR EAPEDLQAPS LCMSMNIYQS YWPTEFPLLL PNPNLHHPDH 180 HVKNPDPTFD QYPFDTTSKQ SQLLDQDSEK PLLTAAYHPQ WPSTPYFVNG DGTYTYNESN 240 NYPFGINEYA YNATQLEQFD GLVGGLESLI NGSNCTSSSA ESNTSWGDPL ACPPPPPMAY 300 EDCRRGLLQS FPPEQPNQFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	1e-82	MYB family protein