PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013994.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 298aa MW: 33552.8 Da PI: 7.189

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013994.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.7e-14	112	158	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ + +Lr+llP+ +K +Ka+ L ++++++k+L Cse_sc013994.1_g020.1 112 KSHSEAERRRRERINNHLTKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 158 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MCPQSPSSQI PLIMHPHHDN HQSSWTTLSQ PFQQYTFNHV LPQSSLPNGG LFKRVVDGLQ 60 FAYEGSSSST TSPSTDHYLG FQPGSNTFGI QTETTKMTTQ EMADAKAIAA SKSHSEAERR 120 RRERINNHLT KLRSLLPNTT KTDKASLLAE VIQHVKELKH QTSIIAAQLP VPSEIDELII 180 DNTSDEEGRI VIKASLCCDD RSDLLPDLIK TLKMLQLRTL KAEITTIGRR VKNVLFVTGE 240 DHLNSNEDEE VVNHWVYSIT EALKAVVEKT NDGNDCSFAS IKRQRTNNID IFNHRRRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	123	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	9e-66	bHLH family protein