PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013950.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 300aa    MW: 33318.9 Da    PI: 9.6034
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013950.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.44.8e-33137193158
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                            +ep+YVNaKQy++Il+RRq+Rak+e ekk+  ksrkpylheSRh+hA++R+Rg+gGrF
  Cse_sc013950.1_g020.1 137 EEPVYVNAKQYNGILRRRQSRAKAELEKKV-VKSRKPYLHESRHQHAMKRARGCGGRF 193
                            69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MPTKTVDGDR HSEAEAQTIS PSGVYSQPWW HGVGSAFGET NGVIKVGAQL QTTSDGDTDS  60
STAPQSGLKV NNGQEHQQAK QVETNSPMEL LGHSIVLTSN PYQDPHYAGM MTYGTRAHPH  120
LLGIHQSRMA LPLQMEEEPV YVNAKQYNGI LRRRQSRAKA ELEKKVVKSR KPYLHESRHQ  180
HAMKRARGCG GRFLNTKKLD SDKTTNSTQQ KGPKSGLAIS MKSFNSTGSD HLSTDYSGNS  240
SIFEDMLKRN TSANGNKIDH SSLSSTYNFH LMGREEGVHY FKRDKGNMLN QVSESDSYYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.23e-46NF-YA family protein