PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013928.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28981.3 Da PI: 6.5135 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+++Ed +l+ +++ +G ++W+ ++ g+ R++k+c++rw +yl Cse_sc013928.1_g030.1 14 RGAWSEDEDSKLKAYIETYGHRNWRELPKLAGLSRCGKSCRLRWVNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T eE++l++++++ +Gg+ W+ Ia++++ gR+++++k++w+++l Cse_sc013928.1_g030.1 67 RGNYTSEEEDLIINLHRDFGGK-WSMIAKELP-GRSDNEIKNHWHTHL 112 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MVRAPYFDKN GTKRGAWSED EDSKLKAYIE TYGHRNWREL PKLAGLSRCG KSCRLRWVNY 60 LRPNVKRGNY TSEEEDLIIN LHRDFGGKWS MIAKELPGRS DNEIKNHWHT HLRKRAAQIN 120 YLSFPENKSA QNLESHEDNS MSKLSHLKEE DRVDISLAAE SVRILSAEYI KSSSSSSSSD 180 SCYVGSNSDS SLSSEVKPFE DSLMKPHMAD TFSNTSYDWT SIMDLVNRPF LPSTDHDMLM 240 VDDFLWSGVE HF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16490.1 | 1e-56 | MYB family protein |