PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013880.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 583aa MW: 67344.8 Da PI: 6.5986

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013880.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.2	2.9e-09	55	133	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+ +GF ++k+++k++ +g ++ ++ Csk gk e+e ++ + ++++++t+C kl+ k +k + w++ + HnH++a Cse_sc013880.1_g020.1 55 ARGLGFVIVKTRTKSE--KGWLYEINYGCSKGGKYEREGTE----QWQTSTSKTDCLFKLVAKYHKtKYFWRLRVKDDRHNHDFA 133 8899**99987766..8899*********998877....8889999*********9999***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MDEGTRGVMT KPLQIAGKIQ TAKDGGYVTA AANLKTKVRV FSSDKEVTDW VQNIARGLGF 60 VIVKTRTKSE KGWLYEINYG CSKGGKYERE GTEQWQTSTS KTDCLFKLVA KYHKTKYFWR 120 LRVKDDRHNH DFAESLHGFP YAMRLNDDEF GLVKHMTKYN VQPRHILSSI KERNPDNVSS 180 LRTIYNAQTK IRGAIIGDRT QIKVSYSHLM HSWYTYYERV NEHNELEELF FVHPTSYAIW 240 CTFPEIMLMD STYNTTLFKL PFLEIIGEVI DEKYYPRVII TDRDLALVRA LIRCEVLSLC 300 FFDIISVIHL VGTHESNSEP FMELLKLGLP AWLFLGEGAV GLGIGISLGG KNGEEERGQR 360 NCRNKCNSVK EYESIKWTWD WMVKAPTRGI FEHYYEHLQQ LLVNHADISE YLDNWLQDYA 420 DMFISFITDQ YSSYGQSTTC RVESQHALLK SYLGSTQSNL DTLLGLIDKI LISQENAIKK 480 SFNRSINEKM NKCDIPLFAE LWYKVSKYAL GLMFDELQLT IAAEDCTHQL RSIYGLPCFH 540 EMLYYQIRGK TLSVPWPIIN NPTPEDGPSC EPEDDPSCEN DIR

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MDEGTRGVMT KPLQIAGKIQ TAKDGGYVTA AANLKTKVRV FSSDKEVTDW VQNIARGLGF  60
VIVKTRTKSE KGWLYEINYG CSKGGKYERE GTEQWQTSTS KTDCLFKLVA KYHKTKYFWR  120
LRVKDDRHNH DFAESLHGFP YAMRLNDDEF GLVKHMTKYN VQPRHILSSI KERNPDNVSS  180
LRTIYNAQTK IRGAIIGDRT QIKVSYSHLM HSWYTYYERV NEHNELEELF FVHPTSYAIW  240
CTFPEIMLMD STYNTTLFKL PFLEIIGEVI DEKYYPRVII TDRDLALVRA LIRCEVLSLC  300
FFDIISVIHL VGTHESNSEP FMELLKLGLP AWLFLGEGAV GLGIGISLGG KNGEEERGQR  360
NCRNKCNSVK EYESIKWTWD WMVKAPTRGI FEHYYEHLQQ LLVNHADISE YLDNWLQDYA  420
DMFISFITDQ YSSYGQSTTC RVESQHALLK SYLGSTQSNL DTLLGLIDKI LISQENAIKK  480
SFNRSINEKM NKCDIPLFAE LWYKVSKYAL GLMFDELQLT IAAEDCTHQL RSIYGLPCFH  540
EMLYYQIRGK TLSVPWPIIN NPTPEDGPSC EPEDDPSCEN DIR