PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013848.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 289aa MW: 32765 Da PI: 4.3072 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.7e-16 | 8 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ ++++++ +G++ W++Ia++++ gRt++++k+ w+++l Cse_sc013848.1_g030.1 8 RGNFTPQEEQSIIRLHATFGNK-WSKIASHLP-GRTDNEIKNVWNTHL 53 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
YLRPDLKRGN FTPQEEQSII RLHATFGNKW SKIASHLPGR TDNEIKNVWN THLKKMSLQR 60 LALNINTIDD APNSSSSKIS DSDPNINNEE LTNQGISSSH DQKQASVVEN PKMIVTTTGP 120 ILVQDIIDHP LTPSSSTVSS NSSQDYNAYI NYCNINNPPS HNEEITINNI NIEIPSLESP 180 EDEFWSMLEP PQPINLDNDH EDVDDGSWKL GHDTMEAVEY WVRMLEDELG LEKADPFADT 240 KTTTTSQQIG QNKYQTNSKV DQEEPEIWCK ISDQISPLWP TSPHSFDFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 2e-27 | MYB family protein |