PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013828.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bZIP

Protein Properties

Length: 402aa MW: 42628.5 Da PI: 8.2062

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013828.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	64.1	2.5e-20	270	332	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL +kv++L+ eN +Lk+e+++l+ ++a+lk ++ Cse_sc013828.1_g030.1 270 ERELKRERRKQSNRESARRSRLRKQAEAEELGTKVEALTVENLKLKSEVNQLTINAANLKHQN 332 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MGSCEEAKDS KPEETSSPPP EQQQQQTSYV YPDWAANPAM QAYYGGRMAM PQYFSSPVAS 60 GHPPPPYMWA PMQHMMPPYA AMYPHGGVYA HPGVTVAATP THTDAPAKSS GNSDRGLIKK 120 LKGFDGLAMS IGNANGCSAE GGNDNGVSLR ELKSPDFEYI IMLNSGEAEG SSKGSDGNTT 180 EGAKNGRKRS RGGSSSSSEA VKIEQSEANG GHKKAKGVNV TPGTILGKTV GGIMSSDSGS 240 DLEFKNSPNM TSAIVTMVPN TAVLQVHSNE RELKRERRKQ SNRESARRSR LRKQAEAEEL 300 GTKVEALTVE NLKLKSEVNQ LTINAANLKH QNAKLLEKLK NAQLEQATED PRPTANLLST 360 VEKSLGSGSV VRNDGEANSS GSGAPLRQLL DASPMADAVA AS

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MGSCEEAKDS KPEETSSPPP EQQQQQTSYV YPDWAANPAM QAYYGGRMAM PQYFSSPVAS  60
GHPPPPYMWA PMQHMMPPYA AMYPHGGVYA HPGVTVAATP THTDAPAKSS GNSDRGLIKK  120
LKGFDGLAMS IGNANGCSAE GGNDNGVSLR ELKSPDFEYI IMLNSGEAEG SSKGSDGNTT  180
EGAKNGRKRS RGGSSSSSEA VKIEQSEANG GHKKAKGVNV TPGTILGKTV GGIMSSDSGS  240
DLEFKNSPNM TSAIVTMVPN TAVLQVHSNE RELKRERRKQ SNRESARRSR LRKQAEAEEL  300
GTKVEALTVE NLKLKSEVNQ LTINAANLKH QNAKLLEKLK NAQLEQATED PRPTANLLST  360
VEKSLGSGSV VRNDGEANSS GSGAPLRQLL DASPMADAVA AS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	GRKRSRG
2	287	293	RRSRLRK
3	287	294	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-90	bZIP family protein