PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013771.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 140aa MW: 15772.3 Da PI: 6.9454

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013771.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00063	34	56	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg+ F + L H++ H Cse_sc013771.1_g020.1 34 YTCSFCGRKFHGPQALGGHQNAH 56 9***********99999999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 140 aa Download sequence
MNTARNDRGG EDSDDHQKGW FKLSERPTKT MKLYTCSFCG RKFHGPQALG GHQNAHRRER 60 RAVKSYHGFQ VNQSMDMHSL VSTARGHGET DNEAREGILC HVQASDGETL EETWCGSSYS 120 YLTPASQQPD SDTLDLNLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25160.1	1e-10	C2H2 family protein