PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013663.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 710aa MW: 80518.1 Da PI: 4.4546

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013663.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.3	4.6e-10	83	133	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++WT eE+e l +v+++G g+W +I + + +R+ ++k++w+++ Cse_sc013663.1_g030.1 83 QKWTIEEEEALCAGVEKHGFGNWLAILSDSQfastlANRSNINLKDKWRTL 133 69**********************************************985 PP
2	Myb_DNA-binding	34.4	4.9e-11	170	220	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++WTteE+e l +vk++G g+W +I + + +R+ ++k++w+++ Cse_sc013663.1_g030.1 170 QKWTTEEEEALCAGVKKHGYGNWLAILSDSQfasslANRSNINLKDKWRTL 220 69**********************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MATQNQKCTS KEEEAVRAGV EKRGLDKWLA FLSDSQNASS SANRTNTNLK DKCQTVDKSS 60 DAPQDSGINA SMHPPPPTPP RYQKWTIEEE EALCAGVEKH GFGNWLAILS DSQFASTLAN 120 RSNINLKDKW RTLSTSSEMS DSKQRVRAHR INESMHPPPP PPPTPPPRYQ KWTTEEEEAL 180 CAGVKKHGYG NWLAILSDSQ FASSLANRSN INLKDKWRTL SRSSDVSNNK KKVTARRLDD 240 LMHPHQHSTK KISEKRKVEE VSDSQDCPVK EVSDPHDCPV KEVSDPQDSP VKEVNDHRDC 300 SVDKVSNPQD CTIDEVSDPQ DCPVDEVSDP QDCPVDEVSD PQDCTVDEVS EPQDCPVDED 360 LQDCTVVEVS DPQDCPVDED PQVDEDPQDC TVVEVSDPQD CPVDKDPQDC AVVEVSDPQD 420 WSVEEVSDPQ DFPVEEVRDP QDFPIEEVSD SHGCPVDEVS DSQDRPVDEV SDSDVYLIEE 480 LSNSQDHHRS CTNTGQRRVT RSYMVNQVGM LNSEKVHGYL EKLWLSFPED EKSSFTHVDP 540 LWYNLYLNDS NKGKVLNWIK KKDIFARKYV FVPIFQWGHW SVLIFCHFGE SFGSKLKTPC 600 ILLLDSLEKA DHSKQLETAI RKFVLDIYGI LERKEDKRLV SKMPFLVPKV PQQRENEESE 660 FYALYYIKLF VETAPESFST SGGYPYFMKK DWFNSKGLDS FRKALDSSDV

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MATQNQKCTS KEEEAVRAGV EKRGLDKWLA FLSDSQNASS SANRTNTNLK DKCQTVDKSS  60
DAPQDSGINA SMHPPPPTPP RYQKWTIEEE EALCAGVEKH GFGNWLAILS DSQFASTLAN  120
RSNINLKDKW RTLSTSSEMS DSKQRVRAHR INESMHPPPP PPPTPPPRYQ KWTTEEEEAL  180
CAGVKKHGYG NWLAILSDSQ FASSLANRSN INLKDKWRTL SRSSDVSNNK KKVTARRLDD  240
LMHPHQHSTK KISEKRKVEE VSDSQDCPVK EVSDPHDCPV KEVSDPQDSP VKEVNDHRDC  300
SVDKVSNPQD CTIDEVSDPQ DCPVDEVSDP QDCPVDEVSD PQDCTVDEVS EPQDCPVDED  360
LQDCTVVEVS DPQDCPVDED PQVDEDPQDC TVVEVSDPQD CPVDKDPQDC AVVEVSDPQD  420
WSVEEVSDPQ DFPVEEVRDP QDFPIEEVSD SHGCPVDEVS DSQDRPVDEV SDSDVYLIEE  480
LSNSQDHHRS CTNTGQRRVT RSYMVNQVGM LNSEKVHGYL EKLWLSFPED EKSSFTHVDP  540
LWYNLYLNDS NKGKVLNWIK KKDIFARKYV FVPIFQWGHW SVLIFCHFGE SFGSKLKTPC  600
ILLLDSLEKA DHSKQLETAI RKFVLDIYGI LERKEDKRLV SKMPFLVPKV PQQRENEESE  660
FYALYYIKLF VETAPESFST SGGYPYFMKK DWFNSKGLDS FRKALDSSDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17520.1	9e-18	MYB_related family protein