PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013478.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 321aa MW: 36601.1 Da PI: 6.5061

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013478.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.3	2.4e-21	129	190	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ +s++ rsYYrCt++ gC+++k+v++ ++ p +++Y+ +H+++ Cse_sc013478.1_g030.1 129 VDDGHAWRKYGQKQILNSKHQRSYYRCTYKsdqGCQATKQVQQIQDSPPKYKTIYSRDHTCK 190 59*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MESSCWPESL PGNRIQAIQT LTEGQEMINI LCEMLLWPQK IDSGTISEDG LVVRIQGMFE 60 NTLSIMSSCS SNESIQLMTS DVHSPFSSDE EKPKYSGIHK TITPAKIKRG CYKRSKNTWT 120 STQIASVLVD DGHAWRKYGQ KQILNSKHQR SYYRCTYKSD QGCQATKQVQ QIQDSPPKYK 180 TIYSRDHTCK NLQKAPAIVL DFPEPGDTST LLSFEKKGYV ENKHVEPNFP SIKQELMEGF 240 PLMGSLRQNE PSISNNYLSV EQNTYTSRRP LEPISMTPFS HGDIISSNAY SYTASTHGHG 300 FEMEQMHERN DFDDFPYELC F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-30	WRKY family protein