PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013471.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 197aa    MW: 21661.1 Da    PI: 4.4782
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013471.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.51.1e-087091426
                           ---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                           e C f+++ GtC  G+rC++ H+
  Cse_sc013471.1_g030.1 70 EVCTFYQK-GTCVNGSRCRYDHV 91
                           68******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MSPNRQGVSP PTTCDADDIQ EDQGLNDIAL TYIGVPDSIV EAPRTGEPQT YVEHSVLHAE  60
LEGERMDIDE VCTFYQKGTC VNGSRCRYDH VKVAQPKVQA YASSLTYPYQ FAVSEPVSET  120
TDPGENELLN DVVQARSTNP ADIVMCSFAA AGNCPGGENC PYVHGDLCST CRKECLHPFR  180
PADREEHKKM CEKKATI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.13e-33C3H family protein