PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013442.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 391aa MW: 44026.1 Da PI: 5.0453

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013442.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.5	1.8e-51	31	158	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPtdeelv +yL++kv gk+l++ ++++e+d+yk+ePw+L ++++++++ewyfF++ dkky++g r nrat++gyWkat Cse_sc013442.1_g030.1 31 LAPGFRFHPTDEELVRYYLRRKVCGKSLRF-QAVSEIDVYKSEPWELAdySSLNSRDQEWYFFCPVDKKYSNGARLNRATDRGYWKAT 117 579***********************99.88**********85447888999************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd+ v + kge++g kktLvf++grap g++tdWvmheyrl Cse_sc013442.1_g030.1 118 GKDRYVRH-KGEVIGSKKTLVFHSGRAPVGKRTDWVMHEYRL 158 ****.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MANVNGNGNE LMVVVAPPPP PPPRLHNPTS LAPGFRFHPT DEELVRYYLR RKVCGKSLRF 60 QAVSEIDVYK SEPWELADYS SLNSRDQEWY FFCPVDKKYS NGARLNRATD RGYWKATGKD 120 RYVRHKGEVI GSKKTLVFHS GRAPVGKRTD WVMHEYRLTD QELGKAGVAQ DAYMLCRIFQ 180 KSGLGPPNAD RYAPFVEEEW EDDVTVFVPG GETEDDMPNG DGSCEKNENV QEAIFQMETQ 240 IIPFGCKRER SEDQVSEPEP ETFSLFTKKS KQSDPNSSNA NGSEDSTTTS HDQTATNLSS 300 ALVEYPLLES IAAKESRPLT TSASFNASTL ENSVPPGYLK FISNLENEVM NVSMEKEQLK 360 IEVMRAQAMI NILQSRVDKL TEENNGLRRG T

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MANVNGNGNE LMVVVAPPPP PPPRLHNPTS LAPGFRFHPT DEELVRYYLR RKVCGKSLRF  60
QAVSEIDVYK SEPWELADYS SLNSRDQEWY FFCPVDKKYS NGARLNRATD RGYWKATGKD  120
RYVRHKGEVI GSKKTLVFHS GRAPVGKRTD WVMHEYRLTD QELGKAGVAQ DAYMLCRIFQ  180
KSGLGPPNAD RYAPFVEEEW EDDVTVFVPG GETEDDMPNG DGSCEKNENV QEAIFQMETQ  240
IIPFGCKRER SEDQVSEPEP ETFSLFTKKS KQSDPNSSNA NGSEDSTTTS HDQTATNLSS  300
ALVEYPLLES IAAKESRPLT TSASFNASTL ENSVPPGYLK FISNLENEVM NVSMEKEQLK  360
IEVMRAQAMI NILQSRVDKL TEENNGLRRG T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-102	NAC family protein