PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013398.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 592aa MW: 68384.7 Da PI: 8.5446

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013398.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.8	2.8e-16	160	255	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++Y++ GF+++k+ ++ + ++g + + +C+keg +++ + + +ek++r++ ++ tgC+a+++++++ +gk++++k+ Cse_sc013398.1_g020.1 160 DMYSTYGEAGGFQIKKAGQRLT-KSGIVQAKYIMCNKEGAPRHINVEtldpkhSEKQKRNTIVHVTGCQARIRLELDIvSGKYKLIKF 246 58*************99888.7887999999***99988778999989999999*************99***** PP FAR1 82 eleHnHela 90 +HnH l Cse_sc013398.1_g020.1 247 IAKHNHMLI 255 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
LKPRRKSLKP RRNNETTARF IETTAGFIET TTGIKQTTNL AITSNTSHQT VAAGIKPPES 60 NLLKPSPSHQ TVPITIEPPP INREIMPPVD ETDLIEVPVD ESQDKDDGVN QNTDSMRSPR 120 PTLYEHTKTP GGSIYWEPHM KGIVVPEEGK YYDTIEEAID MYSTYGEAGG FQIKKAGQRL 180 TKSGIVQAKY IMCNKEGAPR HINVETLDPK HSEKQKRNTI VHVTGCQARI RLELDIVSGK 240 YKLIKFIAKH NHMLIPKEYK HFTKKQRKMT EAEKMFVVKA ATNKIGATRA HNLLTSMKGG 300 YEYVHGTSSD FKNHQRDINI FIGESDAQML INKMENRKLY VPNFTFQYKV EESELVAMFW 360 ADEVAKCNYK EFGDIICKEI YNETDFKKRL NKIIWNMFME PMEFEKKWAK LIEDFGLQNH 420 KWMTKMFKLR EMWIPAYFIT SPLFGLMRMT SRSESENSFF KSFTSPGATL VSFMMSYESA 480 MERQRYIQEH LDFKTLDAAP KCETKLAIEC HAAKVYTRTI FLLVQTEIKE ACWTCAIQEL 540 KIEERCETVT VRDKNPAAYR ILNKEVAKEL VDEGETVATE IFVDYKVYYF LV

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

LKPRRKSLKP RRNNETTARF IETTAGFIET TTGIKQTTNL AITSNTSHQT VAAGIKPPES  60
NLLKPSPSHQ TVPITIEPPP INREIMPPVD ETDLIEVPVD ESQDKDDGVN QNTDSMRSPR  120
PTLYEHTKTP GGSIYWEPHM KGIVVPEEGK YYDTIEEAID MYSTYGEAGG FQIKKAGQRL  180
TKSGIVQAKY IMCNKEGAPR HINVETLDPK HSEKQKRNTI VHVTGCQARI RLELDIVSGK  240
YKLIKFIAKH NHMLIPKEYK HFTKKQRKMT EAEKMFVVKA ATNKIGATRA HNLLTSMKGG  300
YEYVHGTSSD FKNHQRDINI FIGESDAQML INKMENRKLY VPNFTFQYKV EESELVAMFW  360
ADEVAKCNYK EFGDIICKEI YNETDFKKRL NKIIWNMFME PMEFEKKWAK LIEDFGLQNH  420
KWMTKMFKLR EMWIPAYFIT SPLFGLMRMT SRSESENSFF KSFTSPGATL VSFMMSYESA  480
MERQRYIQEH LDFKTLDAAP KCETKLAIEC HAAKVYTRTI FLLVQTEIKE ACWTCAIQEL  540
KIEERCETVT VRDKNPAAYR ILNKEVAKEL VDEGETVATE IFVDYKVYYF LV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-18	FAR1 family protein