PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013340.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 917aa MW: 104486 Da PI: 7.0768

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013340.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	164.6	1.7e-51	26	143	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 ++e k+rwl+++ei+a+L n++ ++++ ++ t+p+sg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+ Cse_sc013340.1_g060.1 26 MEEaKTRWLRPNEIHAVLCNHKLFSISVKPVTKPSSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNNERIHVYYAHG 113 55669********************************************************************************* PP CG-1 89 eenptfqrrcywlLeeelekivlvhylevk 118 e+ +tf rrcywlL+++le+ivlvhy++++ Cse_sc013340.1_g060.1 114 EDRSTFVRRCYWLLDKKLEHIVLVHYRDTQ 143 *************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 917 aa Download sequence
MESGGLIGSD IHGFKTMQDL DMPNMMEEAK TRWLRPNEIH AVLCNHKLFS ISVKPVTKPS 60 SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GNNERIHVYY AHGEDRSTFV 120 RRCYWLLDKK LEHIVLVHYR DTQELQGSPT LPVDSNSSSD PPTSSNLSEE IDAVDQVYFT 180 GVRSESLFCY STDPNATVIN HEMRIHEINT LDWDELGIPN DSNKLITSGG DVARFDHINQ 240 YGLNGSVDNG NYSFGYKLGM ENSLATFQPE TVREANPIDN NDDISKTGIK DTHVANVGTG 300 VLDMMRKDEL PAQDSFGRWM NYIIADSPGS IDDPFLNPEP LFTNQQSLRT PNGDHHESQI 360 FNITEVSPSW AISTEETKIL VVGVFHQMNQ HIANSNLFCV CGDVCVPAEM IQSGVFRCMI 420 TPQSPGVVNL FLSFDGHKPI SQLMEFDFRA PPTPNLMTLT DEKPDWQELK IQMRLAHLLF 480 STSKSLNILS SKIPQKTLKE AIAFAQRTRH IVNSWDYLVN SITEKRVPFQ RAKNSLMELT 540 LQNRLLEWLL ERVLEGGRIP DRDDQGQGVI HLCAVLDYNW AIYPYSWSGL SLDFRDKFGW 600 TALHWAAHFG RQRMVASLLS AGANPNLVTD PTPENPSGCT PADLASKSGY EGLAAYLAEK 660 ALVSHFEAMT LAGNVSGSLQ STFPTNDELT PNLPLTQVNE EEQYLKDTLA AYRTAADAAA 720 RIQAAFREQS FKLRTKEVES SNPEDEARSI IAAMRIQHAF RNHEAKKQIA AAARIQYRFR 780 TWKIRKDFLN KRRQVIKIQS IFRGHQVRRQ YTKIVWSVGV LEKAILRWRL KRRGFRGLQV 840 DPKNDENEEK LENNGEEGFF HASRKQAEER VERSVVRVQA MFRSKRAQED YRKMKLEHIQ 900 ASREYSESLD PVTDMEK

Sequence ? help Back to Top

Protein Sequence Length: 917 aa Download sequence

MESGGLIGSD IHGFKTMQDL DMPNMMEEAK TRWLRPNEIH AVLCNHKLFS ISVKPVTKPS  60
SGTIVLFDRK MLRNFRKDGH NWKKKKDGKT VKEAHEHLKV GNNERIHVYY AHGEDRSTFV  120
RRCYWLLDKK LEHIVLVHYR DTQELQGSPT LPVDSNSSSD PPTSSNLSEE IDAVDQVYFT  180
GVRSESLFCY STDPNATVIN HEMRIHEINT LDWDELGIPN DSNKLITSGG DVARFDHINQ  240
YGLNGSVDNG NYSFGYKLGM ENSLATFQPE TVREANPIDN NDDISKTGIK DTHVANVGTG  300
VLDMMRKDEL PAQDSFGRWM NYIIADSPGS IDDPFLNPEP LFTNQQSLRT PNGDHHESQI  360
FNITEVSPSW AISTEETKIL VVGVFHQMNQ HIANSNLFCV CGDVCVPAEM IQSGVFRCMI  420
TPQSPGVVNL FLSFDGHKPI SQLMEFDFRA PPTPNLMTLT DEKPDWQELK IQMRLAHLLF  480
STSKSLNILS SKIPQKTLKE AIAFAQRTRH IVNSWDYLVN SITEKRVPFQ RAKNSLMELT  540
LQNRLLEWLL ERVLEGGRIP DRDDQGQGVI HLCAVLDYNW AIYPYSWSGL SLDFRDKFGW  600
TALHWAAHFG RQRMVASLLS AGANPNLVTD PTPENPSGCT PADLASKSGY EGLAAYLAEK  660
ALVSHFEAMT LAGNVSGSLQ STFPTNDELT PNLPLTQVNE EEQYLKDTLA AYRTAADAAA  720
RIQAAFREQS FKLRTKEVES SNPEDEARSI IAAMRIQHAF RNHEAKKQIA AAARIQYRFR  780
TWKIRKDFLN KRRQVIKIQS IFRGHQVRRQ YTKIVWSVGV LEKAILRWRL KRRGFRGLQV  840
DPKNDENEEK LENNGEEGFF HASRKQAEER VERSVVRVQA MFRSKRAQED YRKMKLEHIQ  900
ASREYSESLD PVTDMEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein