PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013270.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 324aa MW: 37864.4 Da PI: 7.2414 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 178.8 | 1.4e-55 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv++yL+kk+++++++l +vik++d+y++ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wka Cse_sc013270.1_g020.1 7 VPPGFRFHPTDEELVDYYLRKKIASTRIDL-DVIKDIDLYRIEPWDLQElcKLGTdEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKA 93 69****************************.9***************954544443556***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk+++s k++lvg++ktLv+ykgrap+g+k+dW+mheyrle Cse_sc013270.1_g020.1 94 TGRDKSIYS-KHNLVGMRKTLVYYKGRAPNGQKSDWIMHEYRLE 136 *********.899*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MNNFSHVPPG FRFHPTDEEL VDYYLRKKIA STRIDLDVIK DIDLYRIEPW DLQELCKLGT 60 DEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKSI YSKHNLVGMR KTLVYYKGRA 120 PNGQKSDWIM HEYRLETNEN GATQAKGWVV CRVFKKRITT VRRMDEHDSL CWFDDQVSFM 180 PNFESPRRIT HPHTSNSSYH HQLTAKPELD QLHYSLTHDH SFLQLPQLES PKIQQTFQPS 240 NHQLNINMFY GKNSEQDLQV TDWRVLDKFV ASQLSNDQDP SNPPPSSAQM VEHMNLLLSD 300 SKSDEIASEC ASISTSSCQV DLWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 1e-132 | NAC family protein |