PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013085.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 412aa    MW: 45827.8 Da    PI: 5.2041
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013085.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000293594001054
                            HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                    HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            r R +++ + ++ L+ l+P+    +s+  + + iL +A++Y++ L
  Cse_sc013085.1_g040.1 359 RARKEKLWETINILQNLVPSG---KSGNKDAMVILDEAIDYLRIL 400
                            77888888999*********9...9999*************9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MRWCGLSVDV YRKLGVVVMV CQSAGQTRFR ALKHENGIDG SATIIVKVIA CFQPLQDCQV  60
CYTILNLHRR CDIVHLLVTT SIEWRRVLNP ASNPEEPCDW FNGLTPVAKS ILKQQLPEPQ  120
ASKPQEPCDW FNGLTPMVKS IPIQQLPEPQ ASKPQEPCDW FNGLTPMVNS IPKQLPERQV  180
THGVQKKFLV FDQSNDRTTL IYSSTPAQYH IPKPQLFFNA KKESSVIDKH LNTHFSIPFP  240
DDGNTTASEM QEDSEELKAL LYSDDESDYS EDEEEQSTGH SPDLITGLDR HECKDDNLGE  300
VASSTGCRKR PKHELEDTAS SGKSGLNCSG EAELGCGNNS GVRNGVSDVE SETSPPVKRA  360
RKEKLWETIN ILQNLVPSGK SGNKDAMVIL DEAIDYLRIL KVKAIALGLD SL