PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013037.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 686aa MW: 78352.8 Da PI: 7.3853

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013037.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	54.1	3.1e-17	383	430	3	48
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP..hRk 48 ++ +l++l++yF +p+ +A+++Lgv+ ++LKr CR +GI+ WP hRk Cse_sc013037.1_g020.1 383 QSFTLDTLQQYFRMPLGEASRSLGVSRSTLKRVCRDLGIPTWPlpHRK 430 67899*************************************644787 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MKMDDLFQSS TITSGSENVT KDTIQNTLQQ FVPRDEQVLI QFWSPCKFGK YVLLQTIDQP 60 FIFDIANDEL RNYRRESELI MFAVDDTCNE EDLHPVVRVF KRRLPEWTCN ITSHGYLILP 120 VFDSFTMLYV GVLEIVTIPK YTDFAYEVQQ LHRILKETNL TSPQTFVGPA SNDNRYVHFR 180 EACSLHHLLK ARGVVGRALS SHGSCFCGDV TKLDEEEYSL VHMARATDFT SCFAIYLRSI 240 EHDAEYVLEF FLPVDMKEIA DLQNLMQNLK LHFTLSSGFE LGDLFNTTLI GVSTEVSKLS 300 SAVQPDIIHT SLTAELVELD LLTERETSAQ IDCKNAQDER DSGNDYYNFV ASPILENRIS 360 VEEGYGSVEK KLSVKSRRKR KRQSFTLDTL QQYFRMPLGE ASRSLGVSRS TLKRVCRDLG 420 IPTWPLPHRK KKYAPFGIYT AALLLVRLKR WSCSSNHHGF SPRWWTCDKH KDFLSKSKMS 480 REANDSTMVT SPLAILPIAE PACPTPSFSK PPQEQFGIYE AAFLLLGLKR WRKRSAIMRT 540 LPYNDSLAIG RLSNTIDKFH AFSKQDVGFF LHTNKVTVKA IFDHDTVKFQ FPISSGLQQL 600 KTQVAQRIRL ESSRFDLKYR DEDDDLILIA CDADLRNLMP FSATSGSNIT LKLSVEMPIQ 660 KEIEALMQGI IKNEIKTPVP LGLKCI

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MKMDDLFQSS TITSGSENVT KDTIQNTLQQ FVPRDEQVLI QFWSPCKFGK YVLLQTIDQP  60
FIFDIANDEL RNYRRESELI MFAVDDTCNE EDLHPVVRVF KRRLPEWTCN ITSHGYLILP  120
VFDSFTMLYV GVLEIVTIPK YTDFAYEVQQ LHRILKETNL TSPQTFVGPA SNDNRYVHFR  180
EACSLHHLLK ARGVVGRALS SHGSCFCGDV TKLDEEEYSL VHMARATDFT SCFAIYLRSI  240
EHDAEYVLEF FLPVDMKEIA DLQNLMQNLK LHFTLSSGFE LGDLFNTTLI GVSTEVSKLS  300
SAVQPDIIHT SLTAELVELD LLTERETSAQ IDCKNAQDER DSGNDYYNFV ASPILENRIS  360
VEEGYGSVEK KLSVKSRRKR KRQSFTLDTL QQYFRMPLGE ASRSLGVSRS TLKRVCRDLG  420
IPTWPLPHRK KKYAPFGIYT AALLLVRLKR WSCSSNHHGF SPRWWTCDKH KDFLSKSKMS  480
REANDSTMVT SPLAILPIAE PACPTPSFSK PPQEQFGIYE AAFLLLGLKR WRKRSAIMRT  540
LPYNDSLAIG RLSNTIDKFH AFSKQDVGFF LHTNKVTVKA IFDHDTVKFQ FPISSGLQQL  600
KTQVAQRIRL ESSRFDLKYR DEDDDLILIA CDADLRNLMP FSATSGSNIT LKLSVEMPIQ  660
KEIEALMQGI IKNEIKTPVP LGLKCI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	377	382	RRKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	6e-38	Nin-like family protein