PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012916.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NF-YB

Protein Properties

Length: 345aa MW: 37338.5 Da PI: 9.9021

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012916.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	184.3	9.6e-58	155	250	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkk 89 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplkvyl+k Cse_sc012916.1_g010.1 155 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLAK 242 89************************************************************************************ PP NF-YB 90 yrelegek 97 yre+egek Cse_sc012916.1_g010.1 243 YREIEGEK 250 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MRLDLSLKRI QGRLDFNLSA WHASMKSSNS AQEGFNIRKG FKIVKQNQYP HPTVQLLSTI 60 QSSPIVPYHH HLINNKTNGH NPATCHTSSN YYTPIQRTTP IHSIHPPPKT NKQSPHLPAP 120 LPEKTVNSFS RQISKPMADS DNESGGHNNN DLSAREQDRF LPIANVSRIM KKALPANAKI 180 SKDAKETVQE CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKVYL 240 AKYREIEGEK NVGGRPADVA GVGASAGSDA ASGYNNNNNN GMYVGVGGYP QQQQHHMYNS 300 GYNNQGMGTG TGTGNLGRSG SFGGRGSGVG GGGGSGSGST LKPSR

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MRLDLSLKRI QGRLDFNLSA WHASMKSSNS AQEGFNIRKG FKIVKQNQYP HPTVQLLSTI  60
QSSPIVPYHH HLINNKTNGH NPATCHTSSN YYTPIQRTTP IHSIHPPPKT NKQSPHLPAP  120
LPEKTVNSFS RQISKPMADS DNESGGHNNN DLSAREQDRF LPIANVSRIM KKALPANAKI  180
SKDAKETVQE CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKVYL  240
AKYREIEGEK NVGGRPADVA GVGASAGSDA ASGYNNNNNN GMYVGVGGYP QQQQHHMYNS  300
GYNNQGMGTG TGTGNLGRSG SFGGRGSGVG GGGGSGSGST LKPSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	6e-73	NF-YB family protein