PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012887.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 372aa    MW: 41619.5 Da    PI: 4.5165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012887.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-194292155
                    AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +++ GVr+++ +grWvAeI+d      ++ r++lg+f+taeeAa+a+++a+  l+g
  Cse_sc012887.1_g030.1 42 KKFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 92
                           589*******.7*********33....35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
MARKRKQAVD QEQSPEVNMA WDGRVNEAVV TAALGGARRA KKKFVGVRQR PSGRWVAEIK  60
DTIQKIRVWL GTFDTAEEAA RAYDEAACLL RGTNTRTNFW PSSQAFSTTP ALPSRITSLL  120
LRRLEARNNS LGAATSAQSS SKLPVKYHDE VKPSDVSNEV MEFSDTCFTS RDEMMEFSDT  180
YFSDFLGELD EYLPVSDTMI NDLYSNTNIE PFVPFNVGCG DCDTTAPCSS GDTNGGTEME  240
DEEEERLDFR FIDELGSACS FSPFEIAQEI ASEPIDETEE PLTISEAMKR MKYERKFSAS  300
LYAFHGIPEC LKRKLGPERS KMQRTGHPVN EGKKGMIYEA TEMGRVSSCS DVIDGELSLW  360
SSLDLPTICY FN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-22ERF family protein