PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc012692.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 143aa MW: 16717.7 Da PI: 4.7296 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 57.1 | 3.7e-18 | 2 | 101 | 202 | 301 |
GRAS 202 laVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289 l+V ++++ +llde+v ++ +r++vL+l ++++ ++++ + + ++n+ F +rf eal y+s++fd++ea++ re+ er+ + + l Cse_sc012692.1_g050.1 2 LIVYCAYRFRYLLDETVVVDCPRNKVLSLTRKMKLDMFIQAVINGSYNALFFITRFREALFYFSSMFDMIEANATRETPERMLLKKNL 89 89************************************************************************************** PP GRAS 290 lgreivnvvace 301 +e++nv+ac Cse_sc012692.1_g050.1 90 WVQEAMNVIACD 101 ***********7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MLIVYCAYRF RYLLDETVVV DCPRNKVLSL TRKMKLDMFI QAVINGSYNA LFFITRFREA 60 LFYFSSMFDM IEANATRETP ERMLLKKNLW VQEAMNVIAC DVVPDPFEQR NNEVDISDRS 120 FPLVLSLEEV AGSMLITFCI MLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G29060.1 | 4e-34 | GRAS family protein |