PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012621.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 620aa    MW: 70643.7 Da    PI: 6.3653
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012621.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.37.7e-50341671127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                            lppGfrFhPtdeel+v+yL +k ++ +      +  ++i++vd+yk+ePwdLp+++  ++kewyfF++rd+ky++g+r+nr+t++gyW
  Cse_sc012621.1_g010.1  34 LPPGFRFHPTDEELIVHYLSQKSRSMStiasvPSPPSIIADVDLYKHEPWDLPEMALFGTKEWYFFTPRDRKYPNGSRPNRVTRNGYW 121
                            79********************9999966654222348***************77667999*************************** PP

                    NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                            katg dk+++sk   + +vg+kk Lvfy g+ +kg kt+W+mheyr
  Cse_sc012621.1_g010.1 122 KATGADKPIKSKsdPKVTVGIKKALVFYAGKGSKGIKTNWIMHEYR 167
                            ***********9666677***************************9 PP
2NAM160.56.7e-503384711127
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                            lppGfrFhPtdeel+v+yL +k ++ +     ++  ++i++vd+yk+ePwdLp+++  ++kewyfF++rd+ky++g+r+nr+t++gyW
  Cse_sc012621.1_g010.1 338 LPPGFRFHPTDEELIVHYLSQKSRSMSaiasvTSPPSIIADVDLYKHEPWDLPEMALFGTKEWYFFTPRDRKYPNGSRPNRVTRNGYW 425
                            79*********************999977554233348***************77667999*************************** PP

                    NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
                            katg+dk+++sk   + +vg+kk Lvfy g+  kg kt+W+mheyr
  Cse_sc012621.1_g010.1 426 KATGTDKPIKSKsdPKVTVGIKKALVFYAGKGTKGIKTNWIMHEYR 471
                            ***********9666677***************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    
MELVKCRFHI QLNMRSPTKH VTKTVRDAEA ELNLPPGFRF HPTDEELIVH YLSQKSRSMS  60
TIASVPSPPS IIADVDLYKH EPWDLPEMAL FGTKEWYFFT PRDRKYPNGS RPNRVTRNGY  120
WKATGADKPI KSKSDPKVTV GIKKALVFYA GKGSKGIKTN WIMHEYRHPT ASKLDDWVLC  180
RLYNKKNNPK EMIILQEDNS VRHSRPDLHP TSPLDEVHSE NSISNNSDSF GSFEYSDGEF  240
GGTIDSDFMF LGDLQPEPST IDKDTRDQCD VGLIKSLMPK EELDDGNNWL DSLSLEDLHH  300
CLEAMPTNKD SISVSQNMRS PTKHVTKTVR DAEAELNLPP GFRFHPTDEE LIVHYLSQKS  360
RSMSAIASVT SPPSIIADVD LYKHEPWDLP EMALFGTKEW YFFTPRDRKY PNGSRPNRVT  420
RNGYWKATGT DKPIKSKSDP KVTVGIKKAL VFYAGKGTKG IKTNWIMHEY RHPAPSKLDD  480
WVLCRLYNKK NNPKEMIIPP QDNSMCLSLD FHPTSPLDEV HSVNSISNNS DSFGSFEYSE  540
GEFDGTINSD FMFLGDLEPQ PSTKTKDTSD QCDMGLIKSL MQKEELGNNW LDGLSLEDLH  600
HCLEAMPTNY DIYGMPMNYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.13e-67NAC family protein