PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012593.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 751aa MW: 87247.2 Da PI: 8.2324

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012593.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.1	2.4e-12	80	179	4	89
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...............tekerrtraetrtgCkaklkvkkek.dgk 75 + YA + F vrks skk ng++t++ Cs+ gk+++ ++ ++k++r++++t +Cka++ +k ++k Cse_sc012593.1_g040.1 80 KVYAAKGIFGVRKSGSKKW--NGQVTHKYVICSRGGKPRKMAETntliedvqendnvdgKTKRKRRSSTTLNDCKARICLKVIPgTKK 165 67999999****99988..999***********999999********9878888888888999*******9* PP FAR1 76 wevtkleleHnHel 89 +e+++ ++HnH+l Cse_sc012593.1_g040.1 166 YELYDWTENHNHPL 179 ************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
MSTLQWKSQR FMQADDLKVG SKLIITWIKD DVDVDVYDLD PEFIPTPNGS SYWVPNVPVD 60 EKPKKSTRFH TFQEAVNMNK VYAAKGIFGV RKSGSKKWNG QVTHKYVICS RGGKPRKMAE 120 TNTLIEDVQE NDNVDGKTKR KRRSSTTLND CKARICLKVI PGTKKYELYD WTENHNHPLI 180 VQSNMDLSRA RRKLQYGDYM FIHRASLTNI GAQKAHRLRV ALLGRFDKVR GMPVDWSNFR 240 RAMNLFIGDR DAQMLVDKMT KRKEHVPEFS FYHHTIEKKL CRIFWADETM KCNYVAFGDV 300 VSFDATFETN KYNMIFVPFT GVDHHHKCVT FGAALLSDEK HESYCWMLDA FLKTHGKQPL 360 LALTDQDGAL RKAILQVFPD SHHRLCMWHI TQKLPEKVLG DLDDDSEFRK EFHKLVWNVY 420 IGPELFEQRW HDLISKYNLS ENKWLTDMYA IRERWVPGYF SHLPMCGLMK TTSRSESSNA 480 FFQRDKRNDT VVDATVSVNQ LDGTINCSCG HYNRHGYLCR HVFCVFGIQG TKKIPMNYVS 540 DRWRKNVLPN HLREKRHRYG PYIEETEILA SKVTSSIEEC IDLIRNDPEK LEALLTKIKE 600 LKTEIEAELP PQSEPQNKDA LYEDLLGVKA PPVIIIENPP DYSTKGMRSG TTRIVSATEK 660 GKNIKRAQTN RKVPFKPRKY RICGNIGHNR RSCEEAPSKK KLGKNNKGKK KVVEEDSIEE 720 DDQDDEYEDI YEEENIDEDG GDDEDDYSYD E

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

MSTLQWKSQR FMQADDLKVG SKLIITWIKD DVDVDVYDLD PEFIPTPNGS SYWVPNVPVD  60
EKPKKSTRFH TFQEAVNMNK VYAAKGIFGV RKSGSKKWNG QVTHKYVICS RGGKPRKMAE  120
TNTLIEDVQE NDNVDGKTKR KRRSSTTLND CKARICLKVI PGTKKYELYD WTENHNHPLI  180
VQSNMDLSRA RRKLQYGDYM FIHRASLTNI GAQKAHRLRV ALLGRFDKVR GMPVDWSNFR  240
RAMNLFIGDR DAQMLVDKMT KRKEHVPEFS FYHHTIEKKL CRIFWADETM KCNYVAFGDV  300
VSFDATFETN KYNMIFVPFT GVDHHHKCVT FGAALLSDEK HESYCWMLDA FLKTHGKQPL  360
LALTDQDGAL RKAILQVFPD SHHRLCMWHI TQKLPEKVLG DLDDDSEFRK EFHKLVWNVY  420
IGPELFEQRW HDLISKYNLS ENKWLTDMYA IRERWVPGYF SHLPMCGLMK TTSRSESSNA  480
FFQRDKRNDT VVDATVSVNQ LDGTINCSCG HYNRHGYLCR HVFCVFGIQG TKKIPMNYVS  540
DRWRKNVLPN HLREKRHRYG PYIEETEILA SKVTSSIEEC IDLIRNDPEK LEALLTKIKE  600
LKTEIEAELP PQSEPQNKDA LYEDLLGVKA PPVIIIENPP DYSTKGMRSG TTRIVSATEK  660
GKNIKRAQTN RKVPFKPRKY RICGNIGHNR RSCEEAPSKK KLGKNNKGKK KVVEEDSIEE  720
DDQDDEYEDI YEEENIDEDG GDDEDDYSYD E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-50	FAR1 family protein