PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012590.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 205aa    MW: 22637.4 Da    PI: 4.9845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012590.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-181666155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++y+GVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  Cse_sc012590.1_g030.1 16 KKYRGVRMRS-WGSWVSEIRAP---NQKTRIWLGSHSTPEAAARAYDAALLCLKG 66
                           59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MKRKDGTSNL DTLSKKKYRG VRMRSWGSWV SEIRAPNQKT RIWLGSHSTP EAAARAYDAA  60
LLCLKGPSAN LNFPTHHYND LEYSTSAMSP KSIQKVAAAA AAITDPIMTT THSHSSLLND  120
SPCDSSSLLS SPSSSFSHLP ISPLDDEILL ASESLNTSMY EPWSWFNMDA PIYNDVIYDE  180
SMLDPSCSLV IEDDIIGDIP LWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-31ERF family protein