PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012516.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 137aa    MW: 15446.2 Da    PI: 9.53
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012516.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-202071256
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                           +++GVr ++ +g+++AeIrdp++ng  +r +lg+f+taeeAa+a+++a+ +++g+
  Cse_sc012516.1_g020.1 20 RFRGVRKRP-WGKYAAEIRDPNKNG--QRAWLGTFDTAEEAARAYDQAAFNFRGH 71
                           69*******.***********8887..*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MQGGGSSKGK DMHDDGVEVR FRGVRKRPWG KYAAEIRDPN KNGQRAWLGT FDTAEEAARA  60
YDQAAFNFRG HLATLNFPTE YLSKLPEPPS YKSSSKPYTS STGGSSMGKD KNVIVFEYLD  120
DRLLQELLYE TSNEKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-31ERF family protein