PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012464.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 1392aa MW: 160910 Da PI: 7.7235

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012464.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.7	1.5e-07	732	777	47	91
FAR1 47 ktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 ++k+ r+r+ tgC a++k+ ++ +gk+++ k++ HnH+l+p Cse_sc012464.1_g020.1 732 GNDKAIRNRNLRVTGCMARVKLDLDPvSGKYKLVKFNPRHNHTLCP 777 3578899*************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1392 aa Download sequence
MFVNIYISNS DEHEWIGALE RLKKIPLRET LEKLELSYTG LENDYKEIFL DVACLLKGWD 60 KERASRMLES CGFSAIIGLR VLEQKSMIIT TKTSQAEFID MHRHFEEMGK NIVRRLDPDD 120 PSRHSRLWYQ EEIEDILAKD LAAKATKAIA VDSLVKFSSE IVTKGFGSFQ NLRSLCLKSE 180 IDDDCVVKND EIGMIFPNAL KFLSWVGYPH WSLPKTFQAT NLVGLEMPYS RIKRFWEEGE 240 EKVLYKLRYI DLSYSRLRSL DLGLTPNLEQ LYLVECHDFK ELHMPIECPK LTSLELSCSK 300 LSTFDLRLTP NLEKLRLEEC HDLVELHMPI ECLTLRSLNL SHSKLKTLDL GLTPNLEMLD 360 LQDCCHLEEL HTPFGCLKRL VFLNLSGCSK IKSFLFIEQL ESLEVLSLTR LYMKEFPDKI 420 IPRHLDNSLL EFRFRYNDIY ELPSSIEYLQ QLVYLDLHSC RKLKVLPGSI CSLRNLRNLK 480 LYGCSLEELP EDIGRLECLE KLNLSFTSIK HLPDSICMLK NLKTLNLSSC WNLEKVPEDI 540 GLLECLENLI LTECTQLRDV PDSICMLKEL KYLSFLDCIQ IQKLPEELGN LQRLEELNIN 600 GTRIRFLPPS ISLLTELKIC GPKSGIRGIQ GNESASQIKD SEDSKAEGEH QSKKQRTSSE 660 LMSVDDVEGV RIVEEGREVM SVDDVEGVRI VEEGLLAMND AGDAERVRFI VEDDIRSGKL 720 RNINIDTLKS QGNDKAIRNR NLRVTGCMAR VKLDLDPVSG KYKLVKFNPR HNHTLCPEVY 780 RHLSKTERKM VYSEKLFVMK AKTANIGATV AHHIYSSMKG YDLVHGQVMD FKNYFRELNC 840 FIGEGDSQML INKMENRKAY VPNFSFHYKV EDIELVALFW ADEVMKCNFE EFGDIISFDA 900 TFRTNKYNMV FVPFTAIDNH RKSVTIAAGM LKSEDTKSYI WLLESFMTAF NKQPTMVVTD 960 QDGAMKKAIA AVLPESKHRL CMWHITQKVS AKICKKIYDE TDFKRRFNEI VWDMFLEPRG 1020 FEEKWGKLIE DFGLKDHKWM TKMFNMRSAW IPAYFLDSPL FGLMRTTSRS ESENSFFSHF 1080 TNEGSTLINF MICFESAMEK QRHIQEQLDF DSMDSMPKLK TKPMIEKHAA LVYTRTIFLR 1140 VQTEINEGIW DCQIQNVQTG DGCEITLIRD KNVGEYRTLY KEKKRAKVRR HFIRFGFLCR 1200 HIFCVFKNND IEKIPEKYIL RRWTRDIIPP DLRRKRNRYG EKNETIDRLT NEATCLVDEC 1260 LHRLSNDEGK MAEFVEQIRT LKKKVDIAVP NPPSKKDDME KFIGVPKPKK IDVNNPSGAK 1320 NKGGTREVRR KSEREKAIDA SLKPKRKYGE CGVKTNTHTK KTCPLGPKAI AAAKAAAEKA 1380 AAEKSMNITA SN

Sequence ? help Back to Top

Protein Sequence Length: 1392 aa Download sequence

MFVNIYISNS DEHEWIGALE RLKKIPLRET LEKLELSYTG LENDYKEIFL DVACLLKGWD  60
KERASRMLES CGFSAIIGLR VLEQKSMIIT TKTSQAEFID MHRHFEEMGK NIVRRLDPDD  120
PSRHSRLWYQ EEIEDILAKD LAAKATKAIA VDSLVKFSSE IVTKGFGSFQ NLRSLCLKSE  180
IDDDCVVKND EIGMIFPNAL KFLSWVGYPH WSLPKTFQAT NLVGLEMPYS RIKRFWEEGE  240
EKVLYKLRYI DLSYSRLRSL DLGLTPNLEQ LYLVECHDFK ELHMPIECPK LTSLELSCSK  300
LSTFDLRLTP NLEKLRLEEC HDLVELHMPI ECLTLRSLNL SHSKLKTLDL GLTPNLEMLD  360
LQDCCHLEEL HTPFGCLKRL VFLNLSGCSK IKSFLFIEQL ESLEVLSLTR LYMKEFPDKI  420
IPRHLDNSLL EFRFRYNDIY ELPSSIEYLQ QLVYLDLHSC RKLKVLPGSI CSLRNLRNLK  480
LYGCSLEELP EDIGRLECLE KLNLSFTSIK HLPDSICMLK NLKTLNLSSC WNLEKVPEDI  540
GLLECLENLI LTECTQLRDV PDSICMLKEL KYLSFLDCIQ IQKLPEELGN LQRLEELNIN  600
GTRIRFLPPS ISLLTELKIC GPKSGIRGIQ GNESASQIKD SEDSKAEGEH QSKKQRTSSE  660
LMSVDDVEGV RIVEEGREVM SVDDVEGVRI VEEGLLAMND AGDAERVRFI VEDDIRSGKL  720
RNINIDTLKS QGNDKAIRNR NLRVTGCMAR VKLDLDPVSG KYKLVKFNPR HNHTLCPEVY  780
RHLSKTERKM VYSEKLFVMK AKTANIGATV AHHIYSSMKG YDLVHGQVMD FKNYFRELNC  840
FIGEGDSQML INKMENRKAY VPNFSFHYKV EDIELVALFW ADEVMKCNFE EFGDIISFDA  900
TFRTNKYNMV FVPFTAIDNH RKSVTIAAGM LKSEDTKSYI WLLESFMTAF NKQPTMVVTD  960
QDGAMKKAIA AVLPESKHRL CMWHITQKVS AKICKKIYDE TDFKRRFNEI VWDMFLEPRG  1020
FEEKWGKLIE DFGLKDHKWM TKMFNMRSAW IPAYFLDSPL FGLMRTTSRS ESENSFFSHF  1080
TNEGSTLINF MICFESAMEK QRHIQEQLDF DSMDSMPKLK TKPMIEKHAA LVYTRTIFLR  1140
VQTEINEGIW DCQIQNVQTG DGCEITLIRD KNVGEYRTLY KEKKRAKVRR HFIRFGFLCR  1200
HIFCVFKNND IEKIPEKYIL RRWTRDIIPP DLRRKRNRYG EKNETIDRLT NEATCLVDEC  1260
LHRLSNDEGK MAEFVEQIRT LKKKVDIAVP NPPSKKDDME KFIGVPKPKK IDVNNPSGAK  1320
NKGGTREVRR KSEREKAIDA SLKPKRKYGE CGVKTNTHTK KTCPLGPKAI AAAKAAAEKA  1380
AAEKSMNITA SN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-72	FAR1 family protein