PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012442.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 331aa MW: 35955.2 Da PI: 9.1898

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012442.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	165	187	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Cse_sc012442.1_g030.1 165 HECSICGADFTSGQALGGHMRRH 187 78********************9 PP
2	zf-C2H2	12.6	0.0004	233	255	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H Cse_sc012442.1_g030.1 233 HECSICGADFTSGQALGGHMRRH 255 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MEEMAHHMIK GKRTKRRRPS SALTLTLAGP STSSSTTTSE SGASSNQSSG FFQKHTIEFT 60 NMLQDNHTNN DQDIAKCLML LANGDQPLSP QPLNMAMPSR SYAYECKMCD RGFTSFQALG 120 GHRASHNKPQ KGVLEYSKDR TSLLIRPKKP LPCNPSGSTK GSKVHECSIC GADFTSGQAL 180 GGHMRRHRPI TSTTTATNST ATTSNTSYGC HESKKHKTLL SLDLNLPAPX KVHECSICGA 240 DFTSGQALGG HMRRHRPITS TTTATNSTAS TSNTSYGCHE SKKHKTLLPL DLNLPAPVED 300 DHIETKIPYG YMNNQIIVFS SAPSLVNNCH C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	7e-33	C2H2 family protein