PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc012344.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C3H | ||||||||
Protein Properties | Length: 110aa MW: 12705.3 Da PI: 8.6027 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.4 | 2.4e-08 | 28 | 48 | 6 | 26 |
-SGGGGTS--TTTTT-SS-SS CS zf-CCCH 6 CrffartGtCkyGdrCkFaHg 26 C +++rtG+C +G++C+F+H Cse_sc012344.1_g010.1 28 CFHYLRTGWCGFGSQCQFNHL 48 779*****************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence |
EWYLWKLGLG EGENEKEVYP ERPYKGDCFH YLRTGWCGFG SQCQFNHLRD RASSIVGTMS 60 GRHGNYPERM GQPVCKYHDY HHPRPPKQGM GFGSYNPVAL NVLGYPLRPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06410.1 | 3e-27 | C3H family protein |