PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012167.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CAMTA

Protein Properties

Length: 1058aa MW: 118173 Da PI: 5.5175

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012167.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.9	3.1e-56	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 +e ++rwl++ ei++iL n++k+++++e+ +rp++gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+e Cse_sc012167.1_g020.1 20 QEaQHRWLRPAEICEILRNYTKFRIATEPGNRPPNGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGE 107 5559********************************************************************************** PP CG-1 90 enptfqrrcywlLeeelekivlvhylevk 118 en++fqrr+ywlLeeel++ivlvhy+evk Cse_sc012167.1_g020.1 108 ENENFQRRSYWLLEEELSNIVLVHYREVK 136 ************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1058 aa Download sequence
MADGRRYALA AQLDIEQILQ EAQHRWLRPA EICEILRNYT KFRIATEPGN RPPNGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWLL 120 EEELSNIVLV HYREVKGNRT STNRVRDAGE ATPNSLESEE NISASEVESS VSSKFHTYNY 180 PVASQTTDNS TQASEYEDAE SAYSHQSTSR YGSALNLQPP VTVKTDDSLS MPYYPVPSSN 240 DYDGKIQANP DMSFVSLMQG NKDTNSFDTG LTYKSQKDLG MHSWDNAFES YTSGSQAASY 300 QPTHLSPQSY NSSILPGRGN EMQDFRGNSG WQVDAAYDPP SRFNEEVSYA ELFNSFETTN 360 AQGNIELHGA DEDGGKFSKS NLEGNPIVHE KSGALKPPYL EGFMKEGLKK LDSFDRWMSK 420 ELGDVKETQT QSTSGTYWEA VESENGVDDS IISPQVHLDS YVLGPSLSQD QLFSIIDFSP 480 NWAYADSGIK VLITGRFLRS QQELQHCEWA CMFGELEVPA EVVADGVLRC HTPGHKPGRV 540 HFYVTCSNRL ACSEVREFEF KVNESNNQDM DGPDISGDNS NEALLHMRFV KLLSIGSQSS 600 APNVNDPELI RQLSSLIQED NSDWDQMLKA TPEEDFSEKA RNQLLQKLLK EKLYGWLLHK 660 VAEGGKGPSV LDENGQGVLH FAAALGYDWA ILPTVAAGVS INFRDVNGWT ALHWAASCGR 720 ERTVAFLVSQ GAAAGALTDP SPRYPSGRTP ADLAASNGDK GIAGYCAEAA LSTHLELLKL 780 KDAAKEGSDA SGSKAVQTVS ERTPAPVNYG DMPQGLSLKD SLAAVCNATQ AAARIHQVFR 840 VQSFQKKQLK EHGAGEFGLS DERALSLLAL KTARTGQHDE PVHAAAVRIQ NKYRSYKGRK 900 DFLIMRQRIV KIQAHVRGHQ VRKNYRKIIW SVGILDKVIL RWRRRGRGLS GFKPEAIAEG 960 STTTEATPSK EDDDDFFKEG RKQTEQRLQK ALARVKSMAQ SPEAREQYRR LLNVVNDMQE 1020 SKDVYDKALE NSEEVVDFDE DLIDLDALLD DDDAFMTV

Sequence ? help Back to Top

Protein Sequence Length: 1058 aa Download sequence

MADGRRYALA AQLDIEQILQ EAQHRWLRPA EICEILRNYT KFRIATEPGN RPPNGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSIDVLH CYYAHGEENE NFQRRSYWLL  120
EEELSNIVLV HYREVKGNRT STNRVRDAGE ATPNSLESEE NISASEVESS VSSKFHTYNY  180
PVASQTTDNS TQASEYEDAE SAYSHQSTSR YGSALNLQPP VTVKTDDSLS MPYYPVPSSN  240
DYDGKIQANP DMSFVSLMQG NKDTNSFDTG LTYKSQKDLG MHSWDNAFES YTSGSQAASY  300
QPTHLSPQSY NSSILPGRGN EMQDFRGNSG WQVDAAYDPP SRFNEEVSYA ELFNSFETTN  360
AQGNIELHGA DEDGGKFSKS NLEGNPIVHE KSGALKPPYL EGFMKEGLKK LDSFDRWMSK  420
ELGDVKETQT QSTSGTYWEA VESENGVDDS IISPQVHLDS YVLGPSLSQD QLFSIIDFSP  480
NWAYADSGIK VLITGRFLRS QQELQHCEWA CMFGELEVPA EVVADGVLRC HTPGHKPGRV  540
HFYVTCSNRL ACSEVREFEF KVNESNNQDM DGPDISGDNS NEALLHMRFV KLLSIGSQSS  600
APNVNDPELI RQLSSLIQED NSDWDQMLKA TPEEDFSEKA RNQLLQKLLK EKLYGWLLHK  660
VAEGGKGPSV LDENGQGVLH FAAALGYDWA ILPTVAAGVS INFRDVNGWT ALHWAASCGR  720
ERTVAFLVSQ GAAAGALTDP SPRYPSGRTP ADLAASNGDK GIAGYCAEAA LSTHLELLKL  780
KDAAKEGSDA SGSKAVQTVS ERTPAPVNYG DMPQGLSLKD SLAAVCNATQ AAARIHQVFR  840
VQSFQKKQLK EHGAGEFGLS DERALSLLAL KTARTGQHDE PVHAAAVRIQ NKYRSYKGRK  900
DFLIMRQRIV KIQAHVRGHQ VRKNYRKIIW SVGILDKVIL RWRRRGRGLS GFKPEAIAEG  960
STTTEATPSK EDDDDFFKEG RKQTEQRLQK ALARVKSMAQ SPEAREQYRR LLNVVNDMQE  1020
SKDVYDKALE NSEEVVDFDE DLIDLDALLD DDDAFMTV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein